Evidence map›Paper›PMID 38519631›Full record

ArticleNature ecology & evolution2024

Metagenomic analysis of individual mosquito viromes reveals the geographical patterns and drivers of viral diversity.

Yuan-Fei Pan, Hailong Zhao, Qin-Yu Gou, Pei-Bo Shi, Jun-Hua Tian, Yun Feng, Kun Li, Wei-Hong Yang, De Wu, Guangpeng Tang and 32 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature ecology & evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
25.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Vector competence acrossJournal of virology · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

42 authors at 16 institutions in 3 countries.

Yuan-Fei Pan *State Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Hailong Zhao *BGI Research, Shenzhen, China.
Qin-Yu Gou *State Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Pei-Bo ShiBGI Research, Shenzhen, China.
Jun-Hua TianWuhan Center for Disease Control and Prevention, Wuhan, China.
Yun FengDepartment of Viral and Rickettsial Disease Control, Yunnan Provincial Key Laboratory for Zoonosis Control and Prevention, Yunnan Institute of Endemic Disease Control and Prevention, Dali, China.
Kun LiNational Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Wei-Hong YangDepartment of Viral and Rickettsial Disease Control, Yunnan Provincial Key Laboratory for Zoonosis Control and Prevention, Yunnan Institute of Endemic Disease Control and Prevention, Dali, China.
De WuGuangdong Provincial Center for Disease Control and Prevention, Guangzhou, China.
Guangpeng TangGuizhou Center for Disease Control and Prevention, Guiyang, China.
Bing ZhangXinjiang Key Laboratory of Molecular Biology for Endemic Diseases, School of Basic Medical Sciences, Xinjiang Medical University, Urumqi, China.
Zirui RenBGI Research, Shenzhen, China.
Shiqin PengBGI Research, Shenzhen, China.
Geng-Yan LuoState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Shi-Jia LeState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Gen-Yang XinState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Jing WangState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Xin HouState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Min-Wu PengState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Jian-Bin KongState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Xin-Xin ChenState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Chun-Hui YangState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Shi-Qiang MeiState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Yu-Qi LiaoState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Jing-Xia ChengState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Juan WangDepartment of Viral and Rickettsial Disease Control, Yunnan Provincial Key Laboratory for Zoonosis Control and Prevention, Yunnan Institute of Endemic Disease Control and Prevention, Dali, China.
ChaolemenOld Barag Banner Center for Disease Control and Prevention, Hulunbuir, China.
Yu-Hui WuOld Barag Banner Center for Disease Control and Prevention, Hulunbuir, China.
Jian-Bo WangHulunbuir Center for Disease Control and Prevention, Hulunbuir, China.
Tongqing AnState Key Laboratory of Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin, China.
Xinyi HuangState Key Laboratory of Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin, China.
John-Sebastian EdenCentre for Virus Research, Westmead Institute for Medical Research, Westmead, New South Wales, Australia.
Jun LiDepartment of Infectious Diseases and Public Health, Jockey Club College of Veterinary Medicine and Life Sciences, City University of Hong Kong, Hong Kong, China.
Deyin GuoState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Guodong LiangState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Xin JinBGI Research, Shenzhen, China.
Edward C HolmesSydney Institute for Infectious Diseases, School of Medical Sciences, The University of Sydney, Sydney, New South Wales, Australia.
Bo LiMinistry of Education Key Laboratory of Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, China. bool@fudan.edu.cn.
Daxi WangBGI Research, Shenzhen, China. wangdaxi@genomics.cn.
Junhua LiBGI Research, Shenzhen, China. lijunhua@genomics.cn.
Wei-Chen WuState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China. wuweixiongde@126.com.
Mang ShiState Key Laboratory for Biocontrol, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China. shim23@mail.sysu.edu.cn.
Sun Yat-sen University · CNBGI Group (China) · CNHulunbuir University · CNHarbin Veterinary Research Institute · CNYunnan Institute of Endemic Diseases Control and Prevention · CNBGI ResearchCity University of Hong Kong · HKFudan University · CNGuangdong Provincial Center for Disease Control and Prevention · CNGuizhou Center for Disease Control and Prevention · CNNational Institute for Communicable Disease Control and Prevention · CNNational Institute for Viral Disease Control and Prevention · CNTaronga Conservation Society Australia · AUUniversity of Sydney · AUWuhan Center for Disease Control and Prevention · CNXinjiang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mosquito transmitted viruses are responsible for an increasing burden of human disease. Despite this, little is known about the diversity and ecology of viruses within individual mosquito hosts. Here, using a meta-transcriptomic approach, we determined the viromes of 2,438 individual mosquitoes (81 species), spanning ~4,000 km along latitudes and longitudes in China. From these data we identified 393 viral species associated with mosquitoes, including 7 (putative) species of arthropod-borne viruses (that is, arboviruses). We identified potential mosquito species and geographic hotspots of viral diversity and arbovirus occurrence, and demonstrated that the composition of individual mosquito viromes was strongly associated with host phylogeny. Our data revealed a large number of viruses shared among mosquito species or genera, enhancing our understanding of the host specificity of insect-associated viruses. We also detected multiple virus species that were widespread throughout the country, perhaps reflecting long-distance mosquito dispersal. Together, these results greatly expand the known mosquito virome, linked viral diversity at the scale of individual insects to that at a country-wide scale, and offered unique insights into the biogeography and diversity of viruses in insect vectors.

Indexed as

CulicidaeMosquito VectorsViromeAnimalsArbovirusesBiodiversityChinaMetagenomicsPhylogeny

Identifiers

PMID38519631
OpenAlexW4393086822

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.