Evidence map›Paper›PMID 38518780›Full record

ArticleStructure (London, England : 1993)2024

Stabilization of F-actin by Salmonella effector SipA resembles the structural effects of inorganic phosphate and phalloidin.

Ewa Niedzialkowska, Lucas A Runyan, Elena Kudryashova, Edward H Egelman, Dmitri S Kudryashov

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Molecular strategies ofFrontiers in cellular and infection microbiology · 2026
    Review
  2. Article
  3. Actin isoform-specific interactions revealed byProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Effects of Bile on PathogenicBiomolecules · 2025
    Article
  5. The interplay betweenCell insight · 2025
    Review
  6. Article
  7. Antagonistic effects of actin-specific toxins onbioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ewa NiedzialkowskaDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22903, USA.
Lucas A RunyanDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, OH 43210, USA.
Elena KudryashovaDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, OH 43210, USA.
Edward H EgelmanDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22903, USA. Electronic address: egelman@virginia.edu.
Dmitri S KudryashovDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, OH 43210, USA. Electronic address: kudryashov.1@osu.edu.
The Ohio State University · USUniversity of Virginia · US

Funding

Women's Oncology Program - WONP30CA044579 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Jay William FOX · 1987 to 2026
$72.1M
Cryo-EM of Helical Protein and Nucleoprotein Polymers at Near Atomic ResolutionR35GM122510 · NIGMS · UNIVERSITY OF VIRGINIA · PI EDWARD H. EGELMAN · 2017 to 2026
$7.3M
Name Molecular mechanisms of bacterial toxins targeting actin cytoskeletonR01GM114666 · NIGMS · OHIO STATE UNIVERSITY · PI KUDRYASHOV, DMITRI · 2015 to 2025
$3.8M
UVA molecular electron microscopy core for the Mid-Atlantic regionU24GM116790 · NIGMS · UNIVERSITY OF VIRGINIA · PI GALKIN, VITOLD, SAMSO, MONTSERRAT · 2017 to 2021
$2.9M
300 keV Liquid Helium Robotic MicroscopeS10RR025067 · NCRR · UNIVERSITY OF VIRGINIA · PI EGELMAN, EDWARD H. · 2009 to 2009
$2.0M
Molecular and cellular mechanisms of the actin cytoskeleton organization and functionR01GM145813 · NIGMS · OHIO STATE UNIVERSITY · PI KUDRYASHOV, DMITRI · 2022 to 2025
$1.7M
Direct Electron Detector for a Titan Krios Robotic Electron Cryo-MicroscopeS10OD018149 · OD · UNIVERSITY OF VIRGINIA · PI EGELMAN, EDWARD H., YEAGER, MARK JAY · 2014 to 2014
$500k
NCI NIH HHS P30 CA044579NCRR NIH HHS S10 RR025067NIGMS NIH HHS R01 GM114666NIGMS NIH HHS R01 GM145813NIGMS NIH HHS R35 GM122510NIGMS NIH HHS U24 GM116790NIH HHS S10 OD018149
6 · The paper itself

Abstract

Entry of Salmonella into host enterocytes relies on its pathogenicity island 1 effector SipA. We found that SipA binds to F-actin in a 1:2 stoichiometry with sub-nanomolar affinity. A cryo-EM reconstruction revealed that SipA's globular core binds at the groove between actin strands, whereas the extended C-terminal arm penetrates deeply into the inter-strand space, stabilizing F-actin from within. The unusually strong binding of SipA is achieved by a combination of fast association via the core and very slow dissociation dictated by the arm. Similar to P

Indexed as

ActinsBacterial ProteinsPhalloidinePhosphatesProtein BindingActin Depolymerizing FactorsBinding SitesCryoelectron MicroscopyHumansMicrofilament ProteinsModels, MolecularSalmonella typhimuriumActin Depolymerizing FactorsActinsBacterial ProteinsMicrofilament ProteinsPhalloidinePhosphatesSipA protein, Salmonellaactinactin filament stiffnessactin interstrand spaceactin-specific toxinscryo-EMfilament stabilizationphosphate releaseSalmonellaSipAstopped-flow kinetics

Identifiers

PMID38518780
PMCPMC11162321
OpenAlexW4393038232

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.