Evidence map›Paper›PMID 38518124›Full record

ArticleThe Plant cell2024

Arginine methylation of SM-LIKE PROTEIN 4 antagonistically affects alternative splicing during Arabidopsis stress responses.

Yamila Carla Agrofoglio, María José Iglesias, Soledad Perez-Santángelo, María José de Leone, Tino Koester, Rafael Catalá, Julio Salinas, Marcelo J Yanovsky, Dorothee Staiger, Julieta L Mateos

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
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  4. bioRxiv : the preprint server for biology · 2025
    Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Molecular aspects of heat stress sensing in land plants.The Plant journal : for cell and molecular biology · 2025
    Review
  11. APlants (Basel, Switzerland) · 2025
    Article
  12. Assessing the Role ofPlants (Basel, Switzerland) · 2024
    Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Yamila Carla AgrofoglioInstituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE-UBA-CONICET) and Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, C1428EGA Buenos Aires, Argentina.ORCID 0000-0002-0934-8754
María José IglesiasInstituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE-UBA-CONICET) and Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, C1428EGA Buenos Aires, Argentina.ORCID 0000-0002-6007-5069
Soledad Perez-SantángeloFundación Instituto Leloir, Instituto de Investigaciones Bioquímicas de Buenos Aires-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), C1405BWE Buenos Aires, Argentina.ORCID 0000-0002-3497-9603
María José de LeoneFundación Instituto Leloir, Instituto de Investigaciones Bioquímicas de Buenos Aires-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), C1405BWE Buenos Aires, Argentina.ORCID 0000-0001-5915-0351
Tino KoesterRNA Biology and Molecular Physiology, Faculty of Biology, Bielefeld University, 33615 Bielefeld, Germany.ORCID 0000-0003-3984-9813
Rafael CataláDepartamento de Biotecnología Microbiana y de Plantas, Centro de Investigaciones Biológicas Margarita Salas, CSIC, 28040 Madrid, Spain.ORCID 0000-0002-8668-7434
Julio SalinasDepartamento de Biotecnología Microbiana y de Plantas, Centro de Investigaciones Biológicas Margarita Salas, CSIC, 28040 Madrid, Spain.ORCID 0000-0003-2020-0950
Marcelo J YanovskyFundación Instituto Leloir, Instituto de Investigaciones Bioquímicas de Buenos Aires-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), C1405BWE Buenos Aires, Argentina.ORCID 0000-0002-1890-0571
Dorothee StaigerRNA Biology and Molecular Physiology, Faculty of Biology, Bielefeld University, 33615 Bielefeld, Germany.ORCID 0000-0002-1341-1381
Julieta L MateosInstituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE-UBA-CONICET) and Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, C1428EGA Buenos Aires, Argentina.ORCID 0000-0002-1156-6662
Consejo Nacional de Investigaciones Científicas y Técnicas · ARBielefeld University · DECentro de Investigaciones Biológicas Margarita Salas · ES

Funding

Alexander von Humboldt-StiftungANPCyTArgentinean National Council of SciencesBilateral GrantCONICET-MINCyT-DFGMax-Planck Partner Group Program
6 · The paper itself

Abstract

Arabidopsis (Arabidopsis thaliana) PROTEIN ARGININE METHYLTRANSFERASE5 (PRMT5) post-translationally modifies RNA-binding proteins by arginine (R) methylation. However, the impact of this modification on the regulation of RNA processing is largely unknown. We used the spliceosome component, SM-LIKE PROTEIN 4 (LSM4), as a paradigm to study the role of R-methylation in RNA processing. We found that LSM4 regulates alternative splicing (AS) of a suite of its in vivo targets identified here. The lsm4 and prmt5 mutants show a considerable overlap of genes with altered AS raising the possibility that splicing of those genes could be regulated by PRMT5-dependent LSM4 methylation. Indeed, LSM4 methylation impacts AS, particularly of genes linked with stress response. Wild-type LSM4 and an unmethylable version complement the lsm4-1 mutant, suggesting that methylation is not critical for growth in normal environments. However, LSM4 methylation increases with abscisic acid and is necessary for plants to grow under abiotic stress. Conversely, bacterial infection reduces LSM4 methylation, and plants that express unmethylable-LSM4 are more resistant to Pseudomonas than those expressing wild-type LSM4. This tolerance correlates with decreased intron retention of immune-response genes upon infection. Taken together, this provides direct evidence that R-methylation adjusts LSM4 function on pre-mRNA splicing in an antagonistic manner in response to biotic and abiotic stress.

Indexed as

Alternative SplicingArabidopsisArabidopsis ProteinsArginineGene Expression Regulation, PlantProtein-Arginine N-MethyltransferasesStress, PhysiologicalAbscisic AcidMethylationMutationRNA-Binding ProteinsAbscisic AcidArabidopsis ProteinsArgininePRMT5 protein, ArabidopsisProtein-Arginine N-MethyltransferasesRNA-Binding Proteins

Identifiers

PMID38518124
PMCPMC11132874
OpenAlexW4393097435

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.