Evidence map›Paper›PMID 38518092›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2024

Trichloroethylene metabolite modulates DNA methylation-dependent gene expression in Th1-polarized CD4+ T cells from autoimmune-prone mice.

Samrat Roy Choudhury, Stephanie D Byrum, Sarah J Blossom

Open access · bronzeAbstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it, 1 citations in OpenAlex.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Samrat Roy ChoudhuryDivision of Hematology/Oncology, Department of Pediatrics, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72202, USA.ORCID 0000-0002-6555-3031
Stephanie D ByrumArkansas Children's Research Institute, Department of Pediatrics, Little Rock, Arkansas 72202, USA.
Sarah J BlossomDepartment of Pharmaceutical Sciences, University of New Mexico, Albuquerque, New Mexico 87131, USA.ORCID 0000-0003-3110-4577
Arkansas Children's Hospital · USUniversity of New Mexico · US

Funding

Translational Regulation in Normal Erythropoiesis and Diamond Blackfan AnemiaP20GM121293 · NIGMS · ARKANSAS CHILDREN'S HOSPITAL RES INST · PI Alan Tackett · 2017 to 2026
$27.6M
Pilot Project CoreP30ES032755 · NIEHS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI FENG, CHANGJIAN (JIM) · 2022 to 2025
$5.2M
Epigenetic modulation of CD4+ T cell differentiation and autoimmunity by trichloroethyleneR01ES030323 · NIEHS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI BLOSSOM, SARAH J · 2020 to 2025
$1.2M
Arkansas Children's Research Institute and the Center for Translational Pediatric ResearchInstitute of Environmental Health Sciences R01ES030323NIEHS NIH HHS P30 ES032755NIEHS NIH HHS R01 ES030323NIGMS NIH HHS P20 GM121293NIGMS NIH HHS P20GM121293NIH HHSUniversity of New Mexico College of Pharmacy
6 · The paper itself

Abstract

Trichloroethylene (TCE) is an industrial solvent and widespread environmental contaminant associated with CD4+ T-cell activation and autoimmune disease. Prior studies showed that exposure to TCE in the drinking water of autoimmune-prone mice expanded effector/memory CD4+ T cells with an interferon-γ (IFN-γ)-secreting Th1-like phenotype. However, very little is known how TCE exposure skews CD4+ T cells towards this pro-inflammatory Th1 subset. As observed previously, TCE exposure was associated with hypermethylation of regions of the genome related to transcriptional repression in purified effector/memory CD4 T cells. We hypothesized that TCE modulates transcriptional and/or epigenetic programming of CD4+ T cells as they differentiate from a naive to effector phenotype. In the current study, purified naive CD4 T cells from both male and female autoimmune-prone MRL/MpJ mice were activated ex vivo and polarized towards a Th1 subset for 4 days in the presence or absence of the oxidative metabolite of TCE, trichloroacetaldehyde hydrate (TCAH) in vitro. An RNA-seq assessment and reduced representation bisulfite sequencing for DNA methylation were conducted on Th1 cells or activated, non-polarized cells. The results demonstrated TCAH's ability to regulate key genes involved in the immune response and autoimmunity, including Ifng, by altering the level of DNA methylation at the gene promoter. Intriguing sex differences were observed and for the most part, the effects were more robust in females compared to males. In conclusion, TCE via TCAH epigenetically regulates gene expression in CD4+ T cells. These results may have implications for mechanistic understanding or future therapeutics for autoimmunity.

Indexed as

DNA MethylationTh1 CellsTrichloroethyleneAnimalsAutoimmune DiseasesAutoimmunityCD4-Positive T-LymphocytesEpigenesis, GeneticFemaleGene Expression RegulationInterferon-gammaMaleMiceMice, Inbred MRL lprInterferon-gammaTrichloroethyleneautoimmuneCD4 T cellDNA methylationtrichloroethylene

Identifiers

PMID38518092
PMCPMC11131021
OpenAlexW4393097396

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.