Evidence map›Paper›PMID 38515300›Full record

ArticleBiophysical journal2024

Data-driven classification of individual cells by their non-Markovian motion.

Anton Klimek, Debasmita Mondal, Stephan Block, Prerna Sharma, Roland R Netz

Abstract read
In one paragraph

Article in Biophysical journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Hierarchical friction memory leads to subdiffusive configurational dynamics of fast-folding proteins.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Cell migration: Beyond Brownian motion.Biophysical journal · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Anton KlimekFachbereich Physik, Freie Universität Berlin, Berlin, Germany.
Debasmita MondalDepartment of Physics, Indian Institute of Science, Bangalore, India; James Franck Institute, University of Chicago, Chicago, Illinois.
Stephan BlockInstitut für Chemie und Biochemie, Freie Universität Berlin, Berlin, Germany.
Prerna SharmaDepartment of Physics, Indian Institute of Science, Bangalore, India; Department of Bioengineering, Indian Institute of Science, Bangalore, India.
Roland R NetzFachbereich Physik, Freie Universität Berlin, Berlin, Germany. Electronic address: rnetz@physik.fu-berlin.de.

Funding

Wellcome Trust
6 · The paper itself

Abstract

We present a method to differentiate organisms solely by their motion based on the generalized Langevin equation (GLE) and use it to distinguish two different swimming modes of strongly confined unicellular microalgae Chlamydomonas reinhardtii. The GLE is a general model for active or passive motion of organisms and particles that can be derived from a time-dependent general many-body Hamiltonian and in particular includes non-Markovian effects (i.e., the trajectory memory of its past). We extract all GLE parameters from individual cell trajectories and perform an unbiased cluster analysis to group them into different classes. For the specific cell population employed in the experiments, the GLE-based assignment into the two different swimming modes works perfectly, as checked by control experiments. The classification and sorting of single cells and organisms is important in different areas; our method, which is based on motion trajectories, offers wide-ranging applications in biology and medicine.

Indexed as

Chlamydomonas reinhardtiiCluster AnalysisModels, BiologicalMotionMovementSingle-Cell Analysis

Identifiers

PMID38515300
PMCPMC11140416

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.