Evidence map›Paper›PMID 38514904›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2024

Alternative Splicing Underpins the ALMT9 Transporter Function for Vacuolar Malic Acid Accumulation in Apple.

Chunlong Li, Srinivasan Krishnan, Mengxia Zhang, Dagang Hu, Dong Meng, Janin Riedelsberger, Laura Dougherty, Kenong Xu, Miguel A Piñeros, Lailiang Cheng

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

  1. Alternative splicing rewires banana aroma biosynthesis.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  11. Frontiers in plant science · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Chunlong LiHorticulture Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, 14853, USA.
Srinivasan KrishnanBoyce Thompson Institute, Ithaca, NY, 14853, USA.
Mengxia ZhangHorticulture Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, 14853, USA.
Dagang HuHorticulture Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, 14853, USA.
Dong MengHorticulture Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, 14853, USA.
Janin RiedelsbergerCenter for Bioinformatics, Simulation and Modeling, Department of Bioinformatics, Faculty of Engineering, University of Talca, Talca, 3460000, Chile.
Laura DoughertyHorticulture Section, School of Integrative Plant Science, New York State Agricultural Experiment Station, Cornell University, Geneva, NY, 14456, USA.
Kenong XuHorticulture Section, School of Integrative Plant Science, New York State Agricultural Experiment Station, Cornell University, Geneva, NY, 14456, USA.
Miguel A PiñerosPlant Biology Section, School of Integrative Plant Science and Robert W. Holley Center for Agriculture and Health, USDA-ARS Cornell University, Ithaca, NY, 14853, USA.
Lailiang ChengHorticulture Section, School of Integrative Plant Science, Cornell University, Ithaca, NY, 14853, USA.ORCID 0000-0003-1759-9761
Cornell University · USHuazhong Agricultural University · CNUniversity of Talca · CL

Funding

Specialty Crop Research Initiative 2016-51181-25406USDA NIFA Agriculture and Food Research Initiative 2014-67013-21660
6 · The paper itself

Abstract

Vacuolar malic acid accumulation largely determines fruit acidity, a key trait for the taste and flavor of apple and other fleshy fruits. Aluminum-activated malate transporter 9 (ALMT9/Ma1) underlies a major genetic locus, Ma, for fruit acidity in apple, but how the protein transports malate across the tonoplast is unclear. Here, it is shown that overexpression of the coding sequence of Ma1 (Ma1α) drastically decreases fruit acidity in "Royal Gala" apple, leading to uncovering alternative splicing underpins Ma1's function. Alternative splicing generates two isoforms: Ma1β is 68 amino acids shorter with much lower expression than the full-length protein Ma1α. Ma1β does not transport malate itself but interacts with the functional Ma1α to form heterodimers, creating synergy with Ma1α for malate transport in a threshold manner (When Ma1β/Ma1α ≥ 1/8). Overexpression of Ma1α triggers feedback inhibition on the native Ma1 expression via transcription factor MYB73, decreasing the Ma1β level well below the threshold that leads to significant reductions in Ma1 function and malic acid accumulation in fruit. Overexpression of Ma1α and Ma1β or genomic Ma1 increases both isoforms proportionally and enhances fruit malic acid accumulation. These findings reveal an essential role of alternative splicing in ALMT9-mediated malate transport underlying apple fruit acidity.

Indexed as

Alternative SplicingMalatesMalusFruitGene Expression Regulation, PlantPlant ProteinsVacuolesMalatesmalic acidPlant ProteinsALMT9alternative splicingapplefruit aciditymalate transport

Identifiers

PMID38514904
PMCPMC11165477
OpenAlexW4393091526

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.