Evidence map›Paper›PMID 38514763›Full record

ArticleScientific reports2024

Pseudomonas syringae infectivity correlates to altered transcript and metabolite levels of Arabidopsis mediator mutants.

Jeanette Blomberg, Viktor Tasselius, Alexander Vergara, Fazeelat Karamat, Qari Muhammad Imran, Åsa Strand, Martin Rosvall, Stefan Björklund

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
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  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jeanette BlombergDepartment of Medical Biochemistry and Biophysics, Umeå University, 901 87, Umeå, Sweden.
Viktor TasseliusDepartment of Physics, Umeå University, 901 87, Umeå, Sweden.
Alexander VergaraDepartment of Physics, Umeå University, 901 87, Umeå, Sweden.
Fazeelat KaramatDepartment of Medical Biochemistry and Biophysics, Umeå University, 901 87, Umeå, Sweden.
Qari Muhammad ImranDepartment of Medical Biochemistry and Biophysics, Umeå University, 901 87, Umeå, Sweden.
Åsa StrandDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå University, 901 87, Umeå, Sweden.
Martin RosvallDepartment of Physics, Umeå University, 901 87, Umeå, Sweden.
Stefan BjörklundDepartment of Medical Biochemistry and Biophysics, Umeå University, 901 87, Umeå, Sweden. stefan.bjorklund@umu.se.ORCID 0000-0003-1181-0415
Umeå University · SEUmeå Plant Science Centre · SEUniversity of Gothenburg · SE

Funding

Knut och Alice Wallenbergs Stiftelse 2015-0056Stiftelsen för Strategisk Forskning SB16-0089Vetenskapsrådet 2016-00796Vetenskapsrådet 2016-03943
6 · The paper itself

Abstract

Rapid metabolic responses to pathogens are essential for plant survival and depend on numerous transcription factors. Mediator is the major transcriptional co-regulator for integration and transmission of signals from transcriptional regulators to RNA polymerase II. Using four Arabidopsis Mediator mutants, med16, med18, med25 and cdk8, we studied how differences in regulation of their transcript and metabolite levels correlate to their responses to Pseudomonas syringae infection. We found that med16 and cdk8 were susceptible, while med25 showed increased resistance. Glucosinolate, phytoalexin and carbohydrate levels were reduced already before infection in med16 and cdk8, but increased in med25, which also displayed increased benzenoids levels. Early after infection, wild type plants showed reduced glucosinolate and nucleoside levels, but increases in amino acids, benzenoids, oxylipins and the phytoalexin camalexin. The Mediator mutants showed altered levels of these metabolites and in regulation of genes encoding key enzymes for their metabolism. At later stage, mutants displayed defective levels of specific amino acids, carbohydrates, lipids and jasmonates which correlated to their infection response phenotypes. Our results reveal that MED16, MED25 and CDK8 are required for a proper, coordinated transcriptional response of genes which encode enzymes involved in important metabolic pathways for Arabidopsis responses to Pseudomonas syringae infections.

Indexed as

ArabidopsisArabidopsis ProteinsAmino AcidsCyclin-Dependent Kinase 8Gene Expression Regulation, PlantGlucosinolatesPhytoalexinsPlant DiseasesPlantsPseudomonas syringaeAmino AcidsArabidopsis ProteinsAT5G63610 protein, ArabidopsisCyclin-Dependent Kinase 8GlucosinolatesPhytoalexins

Identifiers

PMID38514763
PMCPMC10958028
OpenAlexW4393055339

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.