Evidence map›Paper›PMID 38514736›Full record

ArticleScientific reports2024

Explainable machine learning for early predicting treatment failure risk among patients with TB-diabetes comorbidity.

An-Zhou Peng, Xiang-Hua Kong, Song-Tao Liu, Hui-Fen Zhang, Ling-Ling Xie, Li-Juan Ma, Qiu Zhang, Yong Chen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Revolutionizing diagnosis of pulmonaryFrontiers in microbiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

An-Zhou Peng *Department of the Fifth Tuberculosis, Chongqing Public Health Medical Center, Chongqing, People's Republic of China.
Xiang-Hua Kong *Department of the Fifth Tuberculosis, Chongqing Public Health Medical Center, Chongqing, People's Republic of China.
Song-Tao LiuDepartment of the Fifth Tuberculosis, Chongqing Public Health Medical Center, Chongqing, People's Republic of China.
Hui-Fen ZhangDepartment of the Fifth Tuberculosis, Chongqing Public Health Medical Center, Chongqing, People's Republic of China.
Ling-Ling XieDepartment of the Fifth Tuberculosis, Chongqing Public Health Medical Center, Chongqing, People's Republic of China.
Li-Juan MaDepartment of the Fifth Tuberculosis, Chongqing Public Health Medical Center, Chongqing, People's Republic of China.
Qiu ZhangDepartment of Endocrinology, First Affiliated Hospital of Anhui Medical University, Hefei, 230022, Anhui, People's Republic of China. zhangqiu@ahmu.edu.cn.
Yong ChenDepartment of Endocrinology, First Affiliated Hospital of Anhui Medical University, Hefei, 230022, Anhui, People's Republic of China. milanoye@163.com.
Chongqing Public Health Medical Center · CNAnhui Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study aims to assess the treatment outcome of patients with diabetes and tuberculosis (TB-DM) at an early stage using machine learning (ML) based on electronic medical records (EMRs). A total of 429 patients were included at Chongqing Public Health Medical Center. The random-forest-based Boruta algorithm was employed to select the essential variables, and four models with a fivefold cross-validation scheme were used for modeling and model evaluation. Furthermore, we adopted SHapley additive explanations to interpret results from the tree-based model. 9 features out of 69 candidate features were chosen as predictors. Among these predictors, the type of resistance was the most important feature, followed by activated partial throm-boplastic time (APTT), thrombin time (TT), platelet distribution width (PDW), and prothrombin time (PT). All the models we established performed above an AUC 0.7 with good predictive performance. XGBoost, the optimal performing model, predicts the risk of treatment failure in the test set with an AUC 0.9281. This study suggests that machine learning approach (XGBoost) presented in this study identifies patients with TB-DM at higher risk of treatment failure at an early stage based on EMRs. The application of a convenient and economy EMRs based on machine learning provides new insight into TB-DM treatment strategies in low and middle-income countries.

Indexed as

Diabetes MellitusComorbidityElectronic Health RecordsHumansMachine LearningTreatment Failure

Identifiers

PMID38514736
PMCPMC10957874
OpenAlexW4393038493

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.