Evidence map›Paper›PMID 38514651›Full record

ArticleNPJ vaccines2024

Genomic analysis of lumpy skin disease virus asian variants and evaluation of its cellular tropism.

Shijie Xie, Lianxin Cui, Zhiyi Liao, Junda Zhu, Shuning Ren, Kang Niu, Hua Li, Fei Jiang, Jiajun Wu, Jie Wang and 4 more

Open access · goldAbstract read
In one paragraph

Article in NPJ vaccines, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Shijie Xie *National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China.ORCID http://orcid.org/0009-0008-4801-8273
Lianxin Cui *National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China.
Zhiyi Liao *National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China.
Junda ZhuNational Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China.
Shuning RenNational Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China.
Kang NiuNational Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China.
Hua LiNational Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China.
Fei JiangChina Animal Disease Control Center, Beijing, 102618, China.
Jiajun WuChina Animal Disease Control Center, Beijing, 102618, China.
Jie WangXinjiang Key Laboratory of Animal Infectious Diseases/Institute of Veterinary Medicine, Xinjiang Academy of Animal Sciences, Urumqi, 830013, China.
Jian WuXinjiang Key Laboratory of Animal Infectious Diseases/Institute of Veterinary Medicine, Xinjiang Academy of Animal Sciences, Urumqi, 830013, China.
Baifen SongNational Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China.
Wenxue WuNational Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China. wuwenxue@cau.edu.cn.
Chen PengNational Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine (CVM), China Agricultural University, Beijing, 100193, China. pengchenea@cau.edu.cn.ORCID http://orcid.org/0000-0001-6141-8775
China Agricultural University · CNChina Animal Disease Control Center · CNXinjiang Academy of Animal Science · CN

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32172822
6 · The paper itself

Abstract

Lumpy skin disease virus (LSDV) is a poxvirus that mainly affects cattle and can lead to symptoms such as severe reduction in milk production as well as infertility and mortality, which has resulted in dramatic economic loss in affected countries in Africa, Europe, and Asia. In this study, we successfully isolated two strains of LSDV from different geographical regions in China. Comparative genomic analyses were performed by incorporating additional LSDV whole genome sequences reported in other areas of Asia. Our analyses revealed that LSDV exhibited an 'open' pan-genome. Phylogenetic analysis unveiled distinct branches of LSDV evolution, signifying the prevalence of multiple lineages of LSDV across various regions in Asia. In addition, a reporter LSDV expressing eGFP directed by a synthetic poxvirus promoter was generated and used to evaluate the cell tropism of LSDV in various mammalian and avian cell lines. Our results demonstrated that LSDV replicated efficiently in several mammalian cell lines, including human A549 cells. In conclusion, our results underscore the necessity for strengthening LSD outbreak control measures and continuous epidemiological surveillance.

Identifiers

PMID38514651
PMCPMC10957905
OpenAlexW4393039918

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.