Evidence map›Paper›PMID 38514648›Full record

ArticleNPJ biofilms and microbiomes2024

Integrative metagenomic and metabolomic analyses reveal the potential of gut microbiota to exacerbate acute pancreatitis.

Jianjun Liu, Qiulong Yan, Shenghui Li, Juying Jiao, Yiming Hao, Guixin Zhang, Qingkai Zhang, Fei Luo, Yue Zhang, Qingbo Lv and 9 more

Open access · goldAbstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 3 pooled it
19.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 3 syntheses or guidelines pooled it, 34 citations in OpenAlex.

  1. Clinical lipidomics in bacterial sepsis: a systematic review of serum and plasma evaluations.Metabolomics : Official journal of the Metabolomic Society · 2026
    Pooled it
  2. Pooled it
  3. Towards Microbiota-Targeted Interventions in Acute Pancreatitis: Evidence From Meta-Analysis and Mendelian Randomization.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Pooled it
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  6. Low-Molecular-Weight Peptides fromInternational journal of molecular sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 1 country.

Jianjun Liu *Clinical Laboratory of Integrative Medicine, The First Affiliated Hospital of Dalian Medical University, Dalian, China.
Qiulong Yan *Department of Microbiology, College of Basic Medical Sciences, Dalian Medical University, Dalian, China.ORCID http://orcid.org/0000-0002-2697-4562
Shenghui Li *Puensum Genetech Institute, Wuhan, China.
Juying JiaoClinical Laboratory of Integrative Medicine, The First Affiliated Hospital of Dalian Medical University, Dalian, China.
Yiming HaoDepartment of Gastrointestinal Surgery, Xijing Hospital, Fourth Military Medical University, Xi'an, China.
Guixin ZhangPancreaticobiliary Centre, Department of General Surgery, The First Affiliated Hospital of Dalian Medical University, Dalian, China.
Qingkai ZhangPancreaticobiliary Centre, Department of General Surgery, The First Affiliated Hospital of Dalian Medical University, Dalian, China.
Fei LuoClinical Laboratory of Integrative Medicine, The First Affiliated Hospital of Dalian Medical University, Dalian, China.
Yue ZhangPuensum Genetech Institute, Wuhan, China.ORCID http://orcid.org/0000-0002-9982-7352
Qingbo LvPuensum Genetech Institute, Wuhan, China.
Wenzhe ZhangDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical University, Dalian, China.
Aiqin ZhangPuensum Genetech Institute, Wuhan, China.
Huiyi SongClinical Laboratory of Integrative Medicine, The First Affiliated Hospital of Dalian Medical University, Dalian, China.
Yi XinDepartment of Biotechnology, College of Basic Medical Sciences, Dalian Medical University, Dalian, China.
Yufang MaDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical University, Dalian, China.
Lawrence OwusuCollege of Integrative Medicine, Dalian Medical University, Dalian, China.
Xiaochi MaSecond Affiliated Hospital, Dalian Medical University, Dalian, China. maxc1978@163.com.
Peiyuan YinClinical Laboratory of Integrative Medicine, The First Affiliated Hospital of Dalian Medical University, Dalian, China. yinperry@126.com.
Dong ShangClinical Laboratory of Integrative Medicine, The First Affiliated Hospital of Dalian Medical University, Dalian, China. shangdong@dmu.edu.cn.ORCID http://orcid.org/0000-0002-2768-5244
Dalian Medical University · CNXijing Hospital · CN

Funding

National Natural Science Foundation of China (National Science Foundation of China) 81873156National Natural Science Foundation of China (National Science Foundation of China) 82004152
6 · The paper itself

Abstract

Early dysbiosis in the gut microbiota may contribute to the severity of acute pancreatitis (AP), however, a comprehensive understanding of the gut microbiome, potential pathobionts, and host metabolome in individuals with AP remains elusive. Hence, we employed fecal whole-metagenome shotgun sequencing in 82 AP patients and 115 matched healthy controls, complemented by untargeted serum metabolome and lipidome profiling in a subset of participants. Analyses of the gut microbiome in AP patients revealed reduced diversity, disrupted microbial functions, and altered abundance of 77 species, influenced by both etiology and severity. AP-enriched species, mostly potential pathobionts, correlated positively with host liver function and serum lipid indicators. Conversely, many AP-depleted species were short-chain fatty acid producers. Gut microflora changes were accompanied by shifts in the serum metabolome and lipidome. Specifically, certain gut species, like enriched Bilophila wadsworthia and depleted Bifidobacterium spp., appeared to contribute to elevated triglyceride levels in biliary or hyperlipidemic AP patients. Through culturing and whole-genome sequencing of bacterial isolates, we identified virulence factors and clinically relevant antibiotic resistance in patient-derived strains, suggesting a predisposition to opportunistic infections. Finally, our study demonstrated that gavage of specific pathobionts could exacerbate pancreatitis in a caerulein-treated mouse model. In conclusion, our comprehensive analysis sheds light on the gut microbiome and serum metabolome in AP, elucidating the role of pathobionts in disease progression. These insights offer valuable perspectives for etiologic diagnosis, prevention, and intervention in AP and related conditions.

Indexed as

Gastrointestinal MicrobiomePancreatitisAcute DiseaseAnimalsHumansMetagenomeMiceRNA, Ribosomal, 16SRNA, Ribosomal, 16S

Identifiers

PMID38514648
PMCPMC10957925
OpenAlexW4393031641

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.