Evidence map›Paper›PMID 38513256›Full record

ArticleThe ISME journal2024

Proteome trait regulation of marine Synechococcus elemental stoichiometry under global change.

Nathan S Garcia, Mingyu Du, Michele Guindani, Matthew R McIlvin, Dawn M Moran, Mak A Saito, Adam C Martiny

Abstract read
In one paragraph

Article in The ISME journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Nathan S GarciaDepartment of Earth System Science, University of California, Irvine, Irvine, CA 92697, United States.
Mingyu DuDepartment of Statistics, University of California, Irvine, Irvine, CA 92697, United States.
Michele GuindaniDepartment of Biostatistics, University of California, Los Angeles, Los Angeles, CA 90095, United States.
Matthew R McIlvinMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, United States.
Dawn M MoranMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, United States.
Mak A SaitoMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, United States.
Adam C MartinyDepartment of Earth System Science, University of California, Irvine, Irvine, CA 92697, United States.

Funding

Division of Integrative Organismal Systems IOS-2137339Division of Ocean Sciences OCE-1848576Information and Computer Sciences Exploration AwardNational Science FoundationSimons FoundationUniversity of California
6 · The paper itself

Abstract

Recent studies have demonstrated regional differences in marine ecosystem C:N:P with implications for carbon and nutrient cycles. Due to strong co-variance, temperature and nutrient stress explain variability in C:N:P equally well. A reductionistic approach can link changes in individual environmental drivers with changes in biochemical traits and cell C:N:P. Thus, we quantified effects of temperature and nutrient stress on Synechococcus chemistry using laboratory chemostats, chemical analyses, and data-independent acquisition mass spectrometry proteomics. Nutrient supply accounted for most C:N:Pcell variability and induced tradeoffs between nutrient acquisition and ribosomal proteins. High temperature prompted heat-shock, whereas thermal effects via the "translation-compensation hypothesis" were only seen under P-stress. A Nonparametric Bayesian Local Clustering algorithm suggested that changes in lipopolysaccharides, peptidoglycans, and C-rich compatible solutes may also contribute to C:N:P regulation. Physiological responses match field-based trends in ecosystem stoichiometry and suggest a hierarchical environmental regulation of current and future ocean C:N:P.

Indexed as

EcosystemSynechococcusBayes TheoremNitrogenProteomeTemperatureNitrogenProteomeelemental stoichiometryglobal changegrowth rate hypothesisnutrient stressproteomeresource allocationSynechococcustemperature stresstraits

Identifiers

PMID38513256
PMCPMC11020310

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.