Evidence map›Paper›PMID 38513135›Full record

ArticleBlood advances2024

Genomic profiling of mycosis fungoides identifies patients at high risk of disease progression.

Léa Fléchon, Inès Arib, Ankit K Dutta, Lama Hasan Bou Issa, Romanos Sklavenitis-Pistofidis, Rémi Tilmont, Chip Stewart, Romain Dubois, Stéphanie Poulain, Marie-Christine Copin and 25 more

Open access · goldAbstract read
In one paragraph

Article in Blood advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Epigenetic dysregulation in mycosis fungoides and sézary syndrome.Frontiers in cell and developmental biology · 2026
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 6 institutions in 2 countries.

Léa FléchonCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0003-4140-475X
Inès AribDepartment of Hematology, Lille Hospital, Lille, France.ORCID 0009-0000-7062-9814
Ankit K DuttaCenter for Prevention of Progression of Blood Cancers, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0003-2535-3729
Lama Hasan Bou IssaCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0002-2561-9980
Romanos Sklavenitis-PistofidisCenter for Prevention of Progression of Blood Cancers, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-8025-9850
Rémi TilmontDepartment of Hematology, Lille Hospital, Lille, France.ORCID 0000-0003-1739-2162
Chip StewartCancer Program, Broad Institute of MIT and Harvard, Cambridge, MA.ORCID 0000-0003-2245-9552
Romain DuboisDepartment of Pathology, Lille Hospital, Lille, France.ORCID 0000-0001-6990-7354
Stéphanie PoulainCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0002-1792-7270
Marie-Christine CopinDepartment of Pathology, Angers University, Angers Hospital, INSERM, CRCI2NA, Angers, France.ORCID 0000-0002-4729-7054
Sahir JavedDepartment of Medical Oncology, Valenciennes Hospital, Valenciennes, France.ORCID 0000-0002-1649-9577
Morgane NudelDepartment of Hematology, Lille Hospital, Lille, France.ORCID 0000-0001-9100-2316
Doriane CavalieriDepartment of Hematology, Lille Hospital, Lille, France.ORCID 0000-0002-4836-7237
Guillaume EscureDepartment of Hematology, Lille Hospital, Lille, France.ORCID 0000-0002-3151-9441
Nicolas GowerDepartment of Hematology, Lille Hospital, Lille, France.
Paul ChauvetDepartment of Hematology, Lille Hospital, Lille, France.ORCID 0000-0001-6326-9283
Nicolas GazeauDepartment of Hematology, Lille Hospital, Lille, France.ORCID 0000-0003-3449-6676
Cynthia SaadeDepartment of Hematology, Lille Hospital, Lille, France.
Marietou Binta ThiamDepartment of Hematology, Lille Hospital, Lille, France.ORCID 0000-0002-1387-0510
Aïcha Ouelkite-OumouchalCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0002-7048-5555
Silvia GaggeroCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0002-2685-1108
Émeline CailliauDepartment of Biostatistics, Lille Hospital, Lille, France.ORCID 0000-0001-5343-6471
Sarah FaizDepartment of Pathology and Dermatology, Lille Hospital, Lille, France.
Olivier CarpentierDepartment of Pathology and Dermatology, Lille Hospital, Lille, France.ORCID 0000-0002-7788-6132
Nicolas DuployezCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0002-3927-1022
Thierry IdziorekCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0001-5893-9131
Laurent MortierDepartment of Pathology and Dermatology, Lille Hospital, Lille, France.ORCID 0000-0002-2644-1790
Martin FigeacLille University, Lille Hospital, CNRS, INSERM, Institut Pasteur de Lille, US 41 - UAR 2014 - PLBS, Lille, France.ORCID 0000-0001-8523-3708
Claude PreudhommeCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0002-1267-9546
Bruno QuesnelCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0002-6563-2709
Suman MitraCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0002-3426-371X
Franck MorschhauserDepartment of Hematology, Lille Hospital, Lille, France.ORCID 0000-0002-3714-9824
Gad GetzCancer Program, Broad Institute of MIT and Harvard, Cambridge, MA.ORCID 0000-0002-0936-0753
Irene M GhobrialCenter for Prevention of Progression of Blood Cancers, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0001-7361-3092
Salomon ManierCanther, ONCOLille, INSERM UMR-S1277, CNRS UMR9020, Lille University, Lille, France.ORCID 0000-0001-7653-711X
Lille’s Cardiology Hospital · FRCentre National de la Recherche Scientifique · FRBroad Institute · USInserm · FRCentre Hospitalier de Valenciennes · FRHarvard University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

abstractMycosis fungoides (MF) is the most prevalent primary cutaneous T-cell lymphoma, with an indolent or aggressive course and poor survival. The pathogenesis of MF remains unclear, and prognostic factors in the early stages are not well established. Here, we characterized the most recurrent genomic alterations using whole-exome sequencing of 67 samples from 48 patients from Lille University Hospital (France), including 18 sequential samples drawn across stages of the malignancy. Genomic data were analyzed on the Broad Institute's Terra bioinformatics platform. We found that gain7q, gain10p15.1 (IL2RA and IL15RA), del10p11.22 (ZEB1), or mutations in JUNB and TET2 are associated with high-risk disease stages. Furthermore, gain7q, gain10p15.1 (IL2RA and IL15RA), del10p11.22 (ZEB1), and del6q16.3 (TNFAIP3) are coupled with shorter survival. Del6q16.3 (TNFAIP3) was a risk factor for progression in patients at low risk. By analyzing the clonal heterogeneity and the clonal evolution of the cohort, we defined different phylogenetic pathways of the disease with acquisition of JUNB, gain10p15.1 (IL2RA and IL15RA), or del12p13.1 (CDKN1B) at progression. These results establish the genomics and clonality of MF and identify potential patients at risk of progression, independent of their clinical stage.

Indexed as

Disease ProgressionMycosis FungoidesAdultAgedExome SequencingFemaleGenomicsHumansMaleMiddle AgedMutationPrognosisRisk FactorsSkin Neoplasms

Identifiers

PMID38513135
PMCPMC11222946
OpenAlexW4393057588

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.