Evidence map›Paper›PMID 38512773›Full record

ArticleIUCrJ2024

The ABC toxin complex from Yersinia entomophaga can package three different cytotoxic components expressed from distinct genetic loci in an unfolded state: the structures of both shell and cargo.

Jason N Busby, Sarah Trevelyan, Cassandra L Pegg, Edward D Kerr, Benjamin L Schulz, Irene Chassagnon, Michael J Landsberg, Mitchell K Weston, Mark R H Hurst, J Shaun Lott

Open access · goldAbstract read
In one paragraph

Article in IUCrJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Jason N BusbySchool of Biological Sciences, University of Auckland, Auckland 1142, New Zealand.ORCID 0000-0002-9805-9224
Sarah TrevelyanSchool of Biological Sciences, University of Auckland, Auckland 1142, New Zealand.
Cassandra L PeggSchool of Chemistry and Molecular Biosciences, University of Central Queensland, Brisbane, Queensland 4072, Australia.
Edward D KerrSchool of Chemistry and Molecular Biosciences, University of Central Queensland, Brisbane, Queensland 4072, Australia.ORCID 0000-0002-0399-6355
Benjamin L SchulzSchool of Chemistry and Molecular Biosciences, University of Central Queensland, Brisbane, Queensland 4072, Australia.
Irene ChassagnonSchool of Chemistry and Molecular Biosciences, University of Central Queensland, Brisbane, Queensland 4072, Australia.
Michael J LandsbergSchool of Chemistry and Molecular Biosciences, University of Central Queensland, Brisbane, Queensland 4072, Australia.ORCID 0000-0002-2464-990X
Mitchell K WestonResilient Agriculture, AgResearch, Lincoln Research Centre, Christchurch 8140, New Zealand.
Mark R H HurstResilient Agriculture, AgResearch, Lincoln Research Centre, Christchurch 8140, New Zealand.ORCID 0000-0001-5826-5253
J Shaun LottSchool of Biological Sciences, University of Auckland, Auckland 1142, New Zealand.ORCID 0000-0003-3660-452X
Central Queensland University · AUUniversity of Auckland · NZAgResearch · NZ

Funding

Marsden Fund 14-UOA-146
6 · The paper itself

Abstract

Bacterial ABC toxin complexes (Tcs) comprise three core proteins: TcA, TcB and TcC. The TcA protein forms a pentameric assembly that attaches to the surface of target cells and penetrates the cell membrane. The TcB and TcC proteins assemble as a heterodimeric TcB-TcC subcomplex that makes a hollow shell. This TcB-TcC subcomplex self-cleaves and encapsulates within the shell a cytotoxic `cargo' encoded by the C-terminal region of the TcC protein. Here, we describe the structure of a previously uncharacterized TcC protein from Yersinia entomophaga, encoded by a gene at a distant genomic location from the genes encoding the rest of the toxin complex, in complex with the TcB protein. When encapsulated within the TcB-TcC shell, the C-terminal toxin adopts an unfolded and disordered state, with limited areas of local order stabilized by the chaperone-like inner surface of the shell. We also determined the structure of the toxin cargo alone and show that when not encapsulated within the shell, it adopts an ADP-ribosyltransferase fold most similar to the catalytic domain of the SpvB toxin from Salmonella typhimurium. Our structural analysis points to a likely mechanism whereby the toxin acts directly on actin, modifying it in a way that prevents normal polymerization.

Indexed as

Bacterial ProteinsBacterial ToxinsYersiniaATP-Binding Cassette TransportersCrystallography, X-RayModels, MolecularATP-Binding Cassette TransportersBacterial ProteinsBacterial ToxinsABC toxinsmacromolecular machinesmulti-protein complexesprotein structuresYersinia entomophaga

Identifiers

PMID38512773
PMCPMC11067744
OpenAlexW4393063031

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.