Evidence map›Paper›PMID 38512750›Full record

ArticleInternational journal of systematic and evolutionary microbiology2024

Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes.

Raúl Riesco, Martha E Trujillo

Abstract read
In one paragraph

Article in International journal of systematic and evolutionary microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 265 papers.

0numbers the graph read from it
0cells of the map it votes in
265citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

265 citing papers in PubMed.

  1. Complete genome sequence ofMicrobiology resource announcements · 2026
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  2. Article
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  4. International journal of systematic and evolutionary microbiology · 2026
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  5. Review
  6. Article
  7. Article
  8. International journal of systematic and evolutionary microbiology · 2026
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  9. An integrated genomic framework forMicrobial genomics · 2026
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  10. Proposal to validateMicrobiology spectrum · 2026
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  11. Article
  12. Journal of microbiology and biotechnology · 2026
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  13. Article
  14. Microorganisms · 2026
    Article
  15. Article
  16. Article
  17. Microorganisms · 2026
    Article
  18. International journal of systematic and evolutionary microbiology · 2026
    Article
  19. International journal of systematic and evolutionary microbiology · 2026
    Article
  20. Article

205 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Raúl RiescoDepartamento de Microbiología y Genética, Campus Miguel de Unamuno, University of Salamanca, 37007 Salamanca, Spain.
Martha E TrujilloDepartamento de Microbiología y Genética, Campus Miguel de Unamuno, University of Salamanca, 37007 Salamanca, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The field of microbial taxonomy is dynamic, aiming to provide a stable and contemporary classification system for prokaryotes. Traditionally, reliance on phenotypic characteristics limited the comprehensive understanding of microbial diversity and evolution. The introduction of molecular techniques, particularly DNA sequencing and genomics, has transformed our perception of prokaryotic diversity. In the past two decades, advancements in genome sequencing have transitioned from traditional methods to a genome-based taxonomic framework, not only to define species, but also higher taxonomic ranks. As technology and databases rapidly expand, maintaining updated standards is crucial. This work seeks to revise the 2018 guidelines for applying genome sequencing data in microbial taxonomy, adapting minimal standards and recommendations to reflect technological progress during this period.

Indexed as

Fatty AcidsBacterial Typing TechniquesBase CompositionDNA, BacterialPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialFatty AcidsRNA, Ribosomal, 16Sgenome standardsgenusminimal standardsOGRIphylogenomicstaxonomy

Identifiers

PMID38512750
PMCPMC10963913

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.