Evidence map›Paper›PMID 38511938›Full record

ArticleJournal of clinical microbiology2024

A novel hybridization capture method for direct whole genome sequencing of clinical specimens to inform Legionnaires' disease investigations.

Phillip Weeber, Navjot Singh, Pascal Lapierre, Lisa Mingle, Danielle Wroblewski, Elizabeth J Nazarian, Wolfgang Haas, Don Weiss, Kimberlee A Musser

Open access · hybridAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of clinical microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Phillip Weeber *Wadsworth Center, New York State Department of Health, Albany, New York, USA.
Navjot Singh *Wadsworth Center, New York State Department of Health, Albany, New York, USA.
Pascal Lapierre *Wadsworth Center, New York State Department of Health, Albany, New York, USA.ORCID 0000-0003-1238-0955
Lisa MingleWadsworth Center, New York State Department of Health, Albany, New York, USA.
Danielle WroblewskiWadsworth Center, New York State Department of Health, Albany, New York, USA.
Elizabeth J NazarianWadsworth Center, New York State Department of Health, Albany, New York, USA.
Wolfgang HaasWadsworth Center, New York State Department of Health, Albany, New York, USA.ORCID 0000-0003-3231-1420
Don WeissNew York City Department of Health and Mental Hygiene, New York, New York, USA.
Kimberlee A MusserWadsworth Center, New York State Department of Health, Albany, New York, USA.ORCID 0000-0003-1922-5405
New York State Department of Health · USNew York City Department of Health and Mental Hygiene · US

Funding

OSELS CDC HHS U60 OE000103
6 · The paper itself

Abstract

The unprecedented precision and resolution of whole genome sequencing (WGS) can provide definitive identification of infectious agents for epidemiological outbreak tracking. WGS approaches, however, are frequently impeded by low pathogen DNA recovery from available primary specimens or unculturable samples. A cost-effective hybrid capture assay for

Indexed as

LegionellaLegionella pneumophilaLegionnaires' DiseasePneumoniaDisease OutbreaksDNAHumansRetrospective StudiesWhole Genome SequencingDNAautopsydirectinvestigationLegionellaNGSrelatednessspecimensWGS

Identifiers

PMID38511938
PMCPMC11005328
OpenAlexW4393040502

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.