Evidence map›Paper›PMID 38511494›Full record

ArticleProtein science : a publication of the Protein Society2024

Oligomerization mediated by the D2 domain of DTX3L is critical for DTX3L-PARP9 reading function of mono-ADP-ribosylated androgen receptor.

Carlos Vela-Rodríguez, Chunsong Yang, Heli I Alanen, Rebeka Eki, Tarek A Abbas, Mirko M Maksimainen, Tuomo Glumoff, Ramona Duman, Armin Wagner, Bryce M Paschal and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Carlos Vela-RodríguezFaculty of Biochemistry and Molecular Medicine & Biocenter Oulu, University of Oulu, Oulu, Finland.
Chunsong YangDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, Virginia, USA.
Heli I AlanenFaculty of Biochemistry and Molecular Medicine & Biocenter Oulu, University of Oulu, Oulu, Finland.
Rebeka EkiDepartment of Radiation Oncology, University of Virginia, Charlottesville, Virginia, USA.
Tarek A AbbasDepartment of Radiation Oncology, University of Virginia, Charlottesville, Virginia, USA.
Mirko M MaksimainenFaculty of Biochemistry and Molecular Medicine & Biocenter Oulu, University of Oulu, Oulu, Finland.
Tuomo GlumoffFaculty of Biochemistry and Molecular Medicine & Biocenter Oulu, University of Oulu, Oulu, Finland.
Ramona DumanDiamond Light Source, Harwell Science and Innovation Campus, Didcot, UK.
Armin WagnerDiamond Light Source, Harwell Science and Innovation Campus, Didcot, UK.
Bryce M PaschalDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, Virginia, USA.
Lari LehtiöFaculty of Biochemistry and Molecular Medicine & Biocenter Oulu, University of Oulu, Oulu, Finland.ORCID 0000-0001-7250-832X
University of Oulu · FIUniversity of Virginia · USDiamond Light Source · GB

Funding

Parp Function in Prostate CancerR01CA214872 · NCI · UNIVERSITY OF VIRGINIA · PI Bryce Paschal · 2017 to 2026
$3.6M
Regulation of re-replication in mammalian cellsR01GM135376 · NIGMS · UNIVERSITY OF VIRGINIA · PI ABBAS, TAREK A. · 2020 to 2024
$1.8M
NCI NIH HHS R01 CA214872NCI NIH HHS R01CA214872NCI NIH HHS R01GM135376NIGMS NIH HHS R01 GM135376
6 · The paper itself

Abstract

Deltex proteins are a family of E3 ubiquitin ligases that encode C-terminal RING and DTC domains that mediate interactions with E2 ubiquitin-conjugating enzymes and recognize ubiquitination substrates. DTX3L is unique among the Deltex proteins based on its N-terminal domain architecture. The N-terminal D1 and D2 domains of DTX3L mediate homo-oligomerization, and the D3 domain interacts with PARP9, a protein that contains tandem macrodomains with ADP-ribose reader function. While DTX3L and PARP9 are known to heterodimerize, and assemble into a high molecular weight oligomeric complex, the nature of the oligomeric structure, including whether this contributes to the ADP-ribose reader function is unknown. Here, we report a crystal structure of the DTX3L N-terminal D2 domain and show that it forms a tetramer with, conveniently, D2 symmetry. We identified two interfaces in the structure: a major, conserved interface with a surface of 973 Å

Indexed as

ReadingReceptors, AndrogenAdenosine Diphosphate RiboseUbiquitinationUbiquitin-Protein LigasesAdenosine Diphosphate RiboseReceptors, AndrogenUbiquitin-Protein LigasesADP‐ribosylationandrogen receptorcrystal structureDTX3Loligomerizationubiquitination

Identifiers

PMID38511494
PMCPMC10955461
OpenAlexW4393055319

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.