Evidence map›Paper›PMID 38509360›Full record

ArticleNature2024

A host-microbiota interactome reveals extensive transkingdom connectivity.

Nicole D Sonnert, Connor E Rosen, Andrew R Ghazi, Eric A Franzosa, Brianna Duncan-Lowey, Jaime A González-Hernández, John D Huck, Yi Yang, Yile Dai, Tyler A Rice and 11 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Review
  2. Toward Meta-Omics Governance of the Urban Microbiome Commons.Annals of the New York Academy of Sciences · 2026
    Review
  3. Article
  4. Article
  5. The emerging role of non-Gastroenterology report · 2026
    Review
  6. Article
  7. A Brief Review of Microbial Omics: Methods and Perspectives.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Molecular Mechanisms of Sepsis-Associated Acute Kidney Injury.Journal of the American Society of Nephrology : JASN · 2025
    Review
  13. Review
  14. CCL17 Influences Borrelia burgdorferi Infection in the Heart.The Journal of infectious diseases · 2025
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Nicole D Sonnert *Department of Immunobiology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-2781-4675
Connor E Rosen *Department of Immunobiology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0003-2442-3676
Andrew R Ghazi *Department of Biostatistics, Harvard T. H. Chan School of Public Health, Boston, MA, USA.
Eric A FranzosaDepartment of Biostatistics, Harvard T. H. Chan School of Public Health, Boston, MA, USA.ORCID 0000-0002-8798-7068
Brianna Duncan-LoweyDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.
Jaime A González-HernándezDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.
John D HuckDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.
Yi YangDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-5200-0614
Yile DaiDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-7761-3361
Tyler A RiceDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.
Mytien T NguyenDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-7343-6882
Deguang SongDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.
Yiyun CaoDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.
Anjelica L MartinDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-9669-8842
Agata A BieleckaDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.
Suzanne FischerDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA.
Changhui GuanThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Julia OhThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.ORCID 0000-0002-5534-7023
Curtis HuttenhowerDepartment of Biostatistics, Harvard T. H. Chan School of Public Health, Boston, MA, USA.ORCID 0000-0002-1110-0096
Aaron M RingDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA. aaronring@fredhutch.org.ORCID 0000-0003-3699-2446
Noah W PalmDepartment of Immunobiology, Yale School of Medicine, New Haven, CT, USA. noah.palm@yale.edu.ORCID 0000-0001-7262-9455

Funding

Metagenomes to Therapeutics: Defining the Rules for Engineering the Skin MicrobiomeDP2GM126893 · NIGMS · JACKSON LABORATORY · PI OH, JULIA · 2017 to 2017
$2.8M
NIGMS NIH HHS DP2 GM126893
6 · The paper itself

Abstract

The myriad microorganisms that live in close association with humans have diverse effects on physiology, yet the molecular bases for these impacts remain mostly unknown

Indexed as

BacteriaHost Microbial InteractionsMicrobiotaPhylogenyProteomeSymbiosisAnimalsFemaleHost TropismHumansMiceOrgan SpecificityProtein BindingReproducibility of ResultsProteome

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.