Evidence map›Paper›PMID 38506570›Full record

ArticleDatabase : the journal of biological databases and curation2023

Development of marine biodiversity database (BISMaL) to enable estimations past habitat conditions for marine life in the northwestern Pacific.

Takashi Hosono, Tomoaki Kitayama, Hideaki Saito, Katsunori Fujikura

Abstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Takashi HosonoGlobal Oceanographic Data Center, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Showa-machi 3173-25, Kanazawa-ku, Yokohama, Kanagawa 236-0001, Japan.ORCID 0000-0001-8459-1511
Tomoaki KitayamaGlobal Oceanographic Data Center, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Showa-machi 3173-25, Kanazawa-ku, Yokohama, Kanagawa 236-0001, Japan.
Hideaki SaitoGlobal Oceanographic Data Center, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Showa-machi 3173-25, Kanazawa-ku, Yokohama, Kanagawa 236-0001, Japan.
Katsunori FujikuraMarine Biodiversity and Environmental Assessment Research Center, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Natsushima-cho 2-15, Yokosuka, Kanagawa 237-0061, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Global activities involving the collection of marine biodiversity information have provided a large amount of biological observation records that cover various spatiotemporal areas. To predict biological responses or distribution changes in response to environmental changes by using these observation records, it is essential to analyze not only the current marine physicochemical environmental conditions but also the past conditions when the organisms were observed. We developed a new function to estimate the past marine environmental conditions for the observation records in our marine biodiversity database (Biological Information System for Marine Life: BISMaL) and examine whether the database can reliably estimate thermal habitats for both benthic and planktonic marine organisms. For the benthic squat lobster Shinkaia crosnieri, the estimated and observed in situ temperatures were similar to each other. For the planktonic chaetognaths Krohnitta pacifica and K. subtilis, the estimated temperatures showed clear seasonal changes specific to their distribution areas. These results indicated that BISMaL can reliably provide past habitat conditions regardless of planktonic or benthic lifestyles. BISMaL, which provides both biological observations and estimated past environmental conditions through web services, could lower the barrier to data access and use and make data-driven science available not only for data scientists but also for various marine scientists, such as taxonomists, ecologists and field scientists. Database URL:  https://www.godac.jamstec.go.jp/bismal/e/.

Indexed as

BiodiversityDatabases, Factual

Identifiers

PMID38506570
PMCPMC10952404

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.