Evidence map›Paper›PMID 38506351›Full record

ArticleNeuro-oncology2024

ARF4-mediated retrograde trafficking as a driver of chemoresistance in glioblastoma.

Shreya Budhiraja, Graysen McManus, Shivani Baisiwala, Ella N Perrault, Sia Cho, Miranda Saathoff, Li Chen, Cheol H Park, Hasaan A Kazi, Crismita Dmello and 5 more

Open access · greenAbstract read
In one paragraph

Article in Neuro-oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 2 countries.

Shreya BudhirajaDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Graysen McManusDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Shivani Baisiwala
Ella N PerraultDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Sia ChoDepartment of Neurobiology, Northwestern University, Evanston, Illinois, USA.
Miranda SaathoffDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Li ChenDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Cheol H ParkDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Hasaan A KaziDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Crismita DmelloDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Peiyu LinDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
C David JamesDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Adam M SonabendDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Dieter H HeilandDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Atique U AhmedDepartment of Neurological Surgery, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.ORCID 0000-0003-4795-0188
Northwestern University · USNeurological Surgery · US

Funding

STINGing GBM: A First-in- Man Clinical Trial in Surgical Resectable Recurrent GBMP50CA221747 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Hui Zhang · 2018 to 2026
$21.4M
Leveraging doxorubicin immune-modulation, blood-brain barrier opening, and personalized medicine for effective immunotherapy in glioblastoma. A mechanistic approach and pharmacokinetic trial.U19CA264338 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Adam M Sonabend · 2021 to 2026
$5.8M
Cellular Plasticity and equilibrium in GBM ProgressionR01NS096376 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Atique U. Ahmed · 2017 to 2026
$3.9M
Blood-brain barrier disruption with implantable ultrasound to enhance paclitaxel delivery: A Phase 1-2 clinical trial in recurrent glioblastomaR01CA245969 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Adam M Sonabend, Roger Stupp · 2020 to 2026
$2.8M
MAPK as target of glioma immunoediting by CD8 T-cells, and predictor of response to immunotherapyR01NS110703 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SONABEND, ADAM M · 2020 to 2024
$1.9M
Role of purine metabolism in chemoresistanceR01NS112856 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI AHMED, ATIQUE U. · 2019 to 2023
$1.7M
Germany Ministry of Education and Research 031L0260BNCI NIH HHS P50 CA221747NCI NIH HHS R01 CA245969NCI NIH HHS U19 CA264338NINDS NIH HHS R01 NS096376NINDS NIH HHS R01 NS110703NINDS NIH HHS R01 NS112856SPORE for Translational Approaches to Brain Cancer 1R01NS096376The Else Kröner-Fresenius Foundation and MEPHISTO
6 · The paper itself

Abstract

backgroundCellular functions hinge on the meticulous orchestration of protein transport, both spatially and temporally. Central to this process is retrograde trafficking, responsible for targeting proteins to the nucleus. Despite its link to many diseases, the implications of retrograde trafficking in glioblastoma (GBM) are still unclear.

methodsTo identify genetic drivers of TMZ resistance, we conducted comprehensive CRISPR-knockout screening, revealing ADP-ribosylation factor 4 (ARF4), a regulator of retrograde trafficking, as a major contributor.

resultsSuppressing ARF4 significantly enhanced TMZ sensitivity in GBM patient-derived xenograft (PDX) models, leading to improved survival rates (P < .01) in both primary and recurrent lines. We also observed that TMZ exposure stimulates ARF4-mediated retrograde trafficking. Proteomics analysis of GBM cells with varying levels of ARF4 unveiled the influence of this pathway on EGFR signaling, with increased nuclear trafficking of EGFR observed in cells with ARF4 overexpression and TMZ treatment. Additionally, spatially resolved RNA-sequencing of GBM patient tissues revealed substantial correlations between ARF4 and crucial nuclear EGFR (nEGFR) downstream targets, such as MYC, STAT1, and DNA-PK. Decreased activity of DNA-PK, a DNA repair protein downstream of nEGFR signaling that contributes to TMZ resistance, was observed in cells with suppressed ARF4 levels. Notably, treatment with DNA-PK inhibitor, KU-57788, in mice with a recurrent PDX line resulted in prolonged survival (P < .01), highlighting the promising therapeutic implications of targeting proteins reliant on ARF4-mediated retrograde trafficking.

conclusionsOur findings demonstrate that ARF4-mediated retrograde trafficking contributes to the development of TMZ resistance, cementing this pathway as a viable strategy to overcome chemoresistance in GBM.

Indexed as

ADP-Ribosylation FactorsBrain NeoplasmsDrug Resistance, NeoplasmGlioblastomaXenograft Model Antitumor AssaysAnimalsAntineoplastic Agents, AlkylatingCell Line, TumorCell ProliferationErbB ReceptorsGene Expression Regulation, NeoplasticHumansMiceProtein TransportSignal TransductionTemozolomideADP-Ribosylation FactorsAntineoplastic Agents, AlkylatingARF4 protein, humanEGFR protein, humanErbB ReceptorsTemozolomideARF4chemoresistanceglioblastomaretrograde traffickingwhole-genome CRISPR screen

Identifiers

PMID38506351
PMCPMC11300013
OpenAlexW4393025149

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.