Evidence map›Paper›PMID 38506092›Full record

ArticleGenetics2024

Naturally segregating genetic variants contribute to thermal tolerance in a Drosophila melanogaster model system.

Patricka A Williams-Simon, Camille Oster, Jordyn A Moaton, Ronel Ghidey, Enoch Ng'oma, Kevin M Middleton, Elizabeth G King

Abstract read
In one paragraph

Article in Genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Patricka A Williams-SimonDepartment of Biology, University of Pennsylvania, 433 S University Ave., 226 Leidy Laboratories, Philadelphia, PA 19104, USA.ORCID 0000-0003-1947-476X
Camille OsterAsh Creek Forest Management, 2796 SE 73rd Ave., Hillsboro, OR 97123, USA.
Jordyn A Moaton2035 W Wellington Ave., Chicago, IL 60618, USA.
Ronel GhideyECHO Data Analysis Center, Johns Hopkins Bloomberg School of Public Health, 504 Cathedral St., Baltimore, MD 2120, USA.
Enoch Ng'omaDivision of Biology, University of Missouri, 226 Tucker Hall, Columbia, MO 65211, USA.ORCID 0000-0002-6741-7922
Kevin M MiddletonDivision of Biology, University of Missouri, 222 Tucker Hall, Columbia, MO 65211, USA.ORCID 0000-0003-4704-1064
Elizabeth G KingDivision of Biology, University of Missouri, 401 Tucker Hall, Columbia, MO 65211, USA.ORCID 0000-0002-9393-4720

Funding

Drosophila Transgenic RNAi Resource ProjectR01GM084947 · NIGMS · HARVARD MEDICAL SCHOOL · PI PERRIMON, NORBERT · 2008 to 2019
$9.8M
MINORITY BIOMEDICAL RESEARCHERS TRAINING INITIATIVER25GM056901 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI HANNINK, MARK · 1999 to 2019
$8.4M
Coordinating nutrition and energy allocation: mechanisms and evolutionR01GM117135 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI KING, ELIZABETH GRIEP · 2016 to 2020
$1.6M
NIGMS NIH HHS R01 GM084947NIGMS NIH HHS R01 GM117135NIGMS NIH HHS R25 GM056901NIH HHS R01GM117135
6 · The paper itself

Abstract

Thermal tolerance is a fundamental physiological complex trait for survival in many species. For example, everyday tasks such as foraging, finding a mate, and avoiding predation are highly dependent on how well an organism can tolerate extreme temperatures. Understanding the general architecture of the natural variants within the genes that control this trait is of high importance if we want to better comprehend thermal physiology. Here, we take a multipronged approach to further dissect the genetic architecture that controls thermal tolerance in natural populations using the Drosophila Synthetic Population Resource as a model system. First, we used quantitative genetics and Quantitative Trait Loci mapping to identify major effect regions within the genome that influences thermal tolerance, then integrated RNA-sequencing to identify differences in gene expression, and lastly, we used the RNAi system to (1) alter tissue-specific gene expression and (2) functionally validate our findings. This powerful integration of approaches not only allows for the identification of the genetic basis of thermal tolerance but also the physiology of thermal tolerance in a natural population, which ultimately elucidates thermal tolerance through a fitness-associated lens.

Indexed as

Drosophila melanogasterQuantitative Trait LociThermotoleranceAnimalsGenetic Variationcomplex traitsDSPRgene expressionQTLRNAiRNA-seqthermal tolerance

Identifiers

PMID38506092
PMCPMC11075556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.