Evidence map›Paper›PMID 38505550›Full record

ArticleFrontiers in microbiology2024

Metagenomic evidence for antibiotic-associated actinomycetes in the Karamay Gobi region.

Shuai Yang, Wei Zhang, Bo Yang, Xin Feng, Yiyang Li, Xiaolin Li, Qin Liu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Shuai Yang *Xinjiang Second Medical College, Xinjiang, China.
Wei Zhang *Key Laboratory of Protection and Utilization of Biological Resources in Tarim Basin Co-funded by Xinjiang Production & Construction Corps and The Ministry of Science & Technology, Tarim University, Alar, China.
Bo Yang *Xinjiang Second Medical College, Xinjiang, China.
Xin FengXinjiang Second Medical College, Xinjiang, China.
Yiyang LiXinjiang Second Medical College, Xinjiang, China.
Xiaolin LiXinjiang Second Medical College, Xinjiang, China.
Qin LiuKey Laboratory of Protection and Utilization of Biological Resources in Tarim Basin Co-funded by Xinjiang Production & Construction Corps and The Ministry of Science & Technology, Tarim University, Alar, China.
Second Affiliated Hospital of Xinjiang Medical University · CNXinjiang Medical University · CNXinjiang Production and Construction Corps · CNTarim University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to the misuse of antibiotics, there is an increasing emergence and spread of multidrug-resistant (MDR) bacteria, leading to a human health crisis. To address clinical antibiotic resistance and prevent/control pathogenic microorganisms, the development of novel antibiotics is essential. This also offers a new approach to discovering valuable actinobacterial flora capable of producing natural bioactive products. In this study, we employed bioinformatics and macro-genome sequencing to collect 15 soil samples from three different locations in the Karamay Gobi region. First, we assessed the diversity of microorganisms in soil samples from different locations, analyzing the content of bacteria, archaea, actinomycetes, and fungi. The biodiversity of soil samples from outside the Gobi was found to be higher than that of soil samples from within and in the center of the Gobi. Second, through microbial interaction network analysis, we identified actinomycetes as the dominant group in the system. We have identified the top four antibiotic genes, such as

Indexed as

actinomycetesantibioticbioinformaticsdesert soilmetagenomic sequencing

Identifiers

PMID38505550
PMCPMC10949947
OpenAlexW4392457639

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.