Evidence map›Paper›PMID 38503338›Full record

ArticleJournal of the Royal Society, Interface2024

A hybrid neural ordinary differential equation model of the cardiovascular system.

Gevik Grigorian, Sandip V George, Sam Lishak, Rebecca J Shipley, Simon Arridge

Abstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Gevik GrigorianDepartment of Mechanical Engineering, University College London, WC1E 6BT London, UK.ORCID 0009-0002-3402-4476
Sandip V GeorgeDepartment of Physics, University of Aberdeen, AB24 3FX Aberdeen, UK.
Sam LishakDepartment of Computer Science, University College London, WC1E 6BT London, UK.ORCID 0009-0005-7359-5724
Rebecca J ShipleyDepartment of Mechanical Engineering, University College London, WC1E 6BT London, UK.ORCID 0000-0002-2818-6228
Simon ArridgeDepartment of Computer Science, University College London, WC1E 6BT London, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the human cardiovascular system (CVS), the interaction between the left and right ventricles of the heart is influenced by the septum and the pericardium. Computational models of the CVS can capture this interaction, but this often involves approximating solutions to complex nonlinear equations numerically. As a result, numerous models have been proposed, where these nonlinear equations are either simplified, or ventricular interaction is ignored. In this work, we propose an alternative approach to modelling ventricular interaction, using a hybrid neural ordinary differential equation (ODE) structure. First, a lumped parameter ODE model of the CVS (including a Newton-Raphson procedure as the numerical solver) is simulated to generate synthetic time-series data. Next, a hybrid neural ODE based on the same model is constructed, where ventricular interaction is instead set to be governed by a neural network. We use a short range of the synthetic data (with various amounts of added measurement noise) to train the hybrid neural ODE model. Symbolic regression is used to convert the neural network into analytic expressions, resulting in a partially learned mechanistic model. This approach was able to recover parsimonious functions with good predictive capabilities and was robust to measurement noise.

Indexed as

Heart VentriclesNeural Networks, ComputerComputer SimulationHumanscardiovascular systemneural networkordinary differential equationssymbolic regressiontime series

Identifiers

PMID38503338
PMCPMC10950468

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.