ArticleJournal of the Royal Society, Interface2024
A hybrid neural ordinary differential equation model of the cardiovascular system.
Article in Journal of the Royal Society, Interface, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed.
- Learning dynamical systems with biochemically informed neural ordinary differential equations.bioRxiv : the preprint server for biology · 2026Article
- Physics-Informed Machine Learning in Biomedical Science and Engineering.Annual review of biomedical engineering · 2026Review
- OPTIMIS: Optimizing Personalized Therapies through Integrated Multiscale Intelligent Simulation.bioRxiv : the preprint server for biology · 2026Article
- Article
- Robust parameter estimation and identifiability analysis with hybrid neural ordinary differential equations in computational biology.NPJ systems biology and applications · 2024Article
- A hybrid neural ordinary differential equation model of the cardiovascular system.Journal of the Royal Society, Interface · 2024Article
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In the human cardiovascular system (CVS), the interaction between the left and right ventricles of the heart is influenced by the septum and the pericardium. Computational models of the CVS can capture this interaction, but this often involves approximating solutions to complex nonlinear equations numerically. As a result, numerous models have been proposed, where these nonlinear equations are either simplified, or ventricular interaction is ignored. In this work, we propose an alternative approach to modelling ventricular interaction, using a hybrid neural ordinary differential equation (ODE) structure. First, a lumped parameter ODE model of the CVS (including a Newton-Raphson procedure as the numerical solver) is simulated to generate synthetic time-series data. Next, a hybrid neural ODE based on the same model is constructed, where ventricular interaction is instead set to be governed by a neural network. We use a short range of the synthetic data (with various amounts of added measurement noise) to train the hybrid neural ODE model. Symbolic regression is used to convert the neural network into analytic expressions, resulting in a partially learned mechanistic model. This approach was able to recover parsimonious functions with good predictive capabilities and was robust to measurement noise.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.