Evidence map›Paper›PMID 38502869›Full record

ArticleThe ISME journal2024

Soil microbiome feedbacks during disturbance-driven forest ecosystem conversion.

Amelia R Nelson, Timothy S Fegel, Robert E Danczak, Marcos V Caiafa, Holly K Roth, Oliver I Dunn, Cosette A Turvold, Thomas Borch, Sydney I Glassman, Rebecca T Barnes and 2 more

Open access · goldAbstract read
In one paragraph

Article in The ISME journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Mycorrhizal legacy mediates seedling success following timber harvesting in Northeastern forests.Ecological applications : a publication of the Ecological Society of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Amelia R NelsonDepartment of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523, United States.
Timothy S FegelRocky Mountain Research Station, US Forest Service, Fort Collins, CO 80526, United States.
Robert E DanczakDivision of Biological Sciences, Pacific Northwest National Laboratory, Richland, WA 99354, United States.
Marcos V CaiafaDepartment of Microbiology and Plant Pathology, University of California Riverside, Riverside, CA 92521, United States.
Holly K RothDepartment of Chemistry, Colorado State University, Fort Collins, CO 80523, United States.
Oliver I DunnThe Environmental Studies Program, Colorado College, Colorado Springs, CO 80946, United States.
Cosette A TurvoldThe Environmental Studies Program, Colorado College, Colorado Springs, CO 80946, United States.
Thomas BorchDepartment of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523, United States.
Sydney I GlassmanDepartment of Microbiology and Plant Pathology, University of California Riverside, Riverside, CA 92521, United States.
Rebecca T BarnesThe Environmental Studies Program, Colorado College, Colorado Springs, CO 80946, United States.
Charles C RhoadesRocky Mountain Research Station, US Forest Service, Fort Collins, CO 80526, United States.
Michael J WilkinsDepartment of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523, United States.
Colorado State University · USColorado College · USUniversity of California, Riverside · USPacific Northwest National Laboratory · USRocky Mountain Research Station · USUS Forest Service · US

Funding

CSU Agricultural Experiment StationFacilities Integrating Collaborations for User ScienceJoint Genome Institute 504279National Science Foundation DEB-2114868Office of Biological and Environmental Research DE-AC02-05CH11231US Bureau of Land Management Joint Fire Science Program Graduate Research Innovation 21-1-01-49US Department of Agriculture National Institute of Food and Agriculture 2021-67019-34608US Department of Energy Office of Science User Facility
6 · The paper itself

Abstract

Disturbances cause rapid changes to forests, with different disturbance types and severities creating unique ecosystem trajectories that can impact the underlying soil microbiome. Pile burning-the combustion of logging residue on the forest floor-is a common fuel reduction practice that can have impacts on forest soils analogous to those following high-severity wildfire. Further, pile burning following clear-cut harvesting can create persistent openings dominated by nonwoody plants surrounded by dense regenerating conifer forest. A paired 60-year chronosequence of burn scar openings and surrounding regenerating forest after clear-cut harvesting provides a unique opportunity to assess whether belowground microbial processes mirror aboveground vegetation during disturbance-induced ecosystem shifts. Soil ectomycorrhizal fungal diversity was reduced the first decade after pile burning, which could explain poor tree seedling establishment and subsequent persistence of herbaceous species within the openings. Fine-scale changes in the soil microbiome mirrored aboveground shifts in vegetation, with short-term changes to microbial carbon cycling functions resembling a postfire microbiome (e.g. enrichment of aromatic degradation genes) and respiration in burn scars decoupled from substrate quantity and quality. Broadly, however, soil microbiome composition and function within burn scar soils converged with that of the surrounding regenerating forest six decades after the disturbances, indicating potential microbial resilience that was disconnected from aboveground vegetation shifts. This work begins to unravel the belowground microbial processes that underlie disturbance-induced ecosystem changes, which are increasing in frequency tied to climate change.

Indexed as

MicrobiotaEcosystemFeedbackForestsSoilSoilecosystem conversionmetagenomicsresiliencesoil microbiome

Identifiers

PMID38502869
PMCPMC11650388
OpenAlexW4392938639

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.