Evidence map›Paper›PMID 38502683›Full record

ArticlePloS one2024

Prevalence and genome features of lake sinai virus isolated from Apis mellifera in the Republic of Korea.

Thi-Thu Nguyen, Mi-Sun Yoo, A-Tai Truong, So Youn Youn, Dong-Ho Kim, Se-Ji Lee, Soon-Seek Yoon, Yun Sang Cho

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. The Role of Pathogens in Bumblebee Decline: A Review.Pathogens (Basel, Switzerland) · 2025
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Thi-Thu NguyenDepartment of Animal and Plant Health Research, Laboratory of Parasitic and Honeybee Diseases, Bacterial Disease Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea.
Mi-Sun YooDepartment of Animal and Plant Health Research, Laboratory of Parasitic and Honeybee Diseases, Bacterial Disease Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea.
A-Tai TruongDepartment of Animal and Plant Health Research, Laboratory of Parasitic and Honeybee Diseases, Bacterial Disease Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea.
So Youn YounDepartment of Animal and Plant Health Research, Laboratory of Parasitic and Honeybee Diseases, Bacterial Disease Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea.
Dong-Ho KimDepartment of Animal and Plant Health Research, Laboratory of Parasitic and Honeybee Diseases, Bacterial Disease Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea.
Se-Ji LeeDepartment of Animal and Plant Health Research, Laboratory of Parasitic and Honeybee Diseases, Bacterial Disease Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea.
Soon-Seek YoonDepartment of Animal and Plant Health Research, Laboratory of Parasitic and Honeybee Diseases, Bacterial Disease Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea.ORCID 0000-0003-0908-8785
Yun Sang ChoDepartment of Animal and Plant Health Research, Laboratory of Parasitic and Honeybee Diseases, Bacterial Disease Division, Animal and Plant Quarantine Agency, Gimcheon, Republic of Korea.ORCID 0000-0003-1346-7067
Animal and Plant Quarantine Agency · KRThai Nguyen University · VN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lake Sinai Virus (LSV) is an emerging pathogen known to affect the honeybee (Apis mellifera). However, its prevalence and genomic characteristics in the Republic of Korea (ROK) remain unexplored. This study aimed to assess the prevalence of and analyze the LSVs by examining 266 honeybee samples from the ROK. Our findings revealed that LSV exhibited the highest infection rate among the pathogens observed in Korean apiaries, particularly during the reported period of severe winter loss (SWL) in A. mellifera apiaries in 2022. Three LSV genotypes- 2, 3, and 4 -were identified using RNA-dependent RNA polymerase gene analysis. Importantly, the infection rates of LSV2 (65.2%) and LSV3 (73.3%) were significantly higher in colonies experiencing SWL than in those experiencing normal winter loss (NWL) (p < 0.03). Furthermore, this study provides the first near-complete genome sequences of the Korean LSV2, LSV3, and LSV4 strains, comprising 5,759, 6,040, and 5,985 nt, respectively. Phylogenetic analysis based on these near-complete genome sequences demonstrated a close relationship between LSVs in the ROK and China. The high LSV infection rate in colonies experiencing a heightened mortality rate during winter suggests that this pathogen might contribute to SWL in ROK. Moreover, the genomic characteristic information on LSVs in this study holds immense potential for epidemiological information and the selection of specific genes suitable for preventing and treating LSV, including the promising utilization of RNA interference medicine in the future.

Indexed as

RNA VirusesVirusesAnimalsBeesPhylogenyPrevalenceRepublic of Korea

Identifiers

PMID38502683
PMCPMC10950237
OpenAlexW4392947911

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.