Evidence map›Paper›PMID 38500596›Full record

ArticleNAR cancer2024

XPA tumor variant leads to defects in NER that sensitize cells to cisplatin.

Alexandra M Blee, Kaitlyn S Gallagher, Hyun-Suk Kim, Mihyun Kim, Suhas S Kharat, Christina R Troll, Areetha D'Souza, Jiyoung Park, P Drew Neufer, Orlando D Schärer and 1 more

Open access · goldAbstract read
In one paragraph

Article in NAR cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Alexandra M BleeDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37205, USA.ORCID 0000-0003-4959-5466
Kaitlyn S GallagherDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37205, USA.
Hyun-Suk KimCenter for Genomic Integrity, Institute for Basic Science, Ulsan 44919, Republic of Korea.
Mihyun KimCenter for Genomic Integrity, Institute for Basic Science, Ulsan 44919, Republic of Korea.
Suhas S KharatDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37205, USA.
Christina R TrollDepartment of Chemistry, Vanderbilt University, Nashville, TN 37240, USA.
Areetha D'SouzaDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37205, USA.
Jiyoung ParkCenter for Genomic Integrity, Institute for Basic Science, Ulsan 44919, Republic of Korea.
P Drew NeuferDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37205, USA.
Orlando D SchärerDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37205, USA.
Walter J ChazinDepartment of Biochemistry, Vanderbilt University, Nashville, TN 37205, USA.
Vanderbilt University · USInstitute for Basic Science · KR

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Ben Ho Park · 1995 to 2026
$172.8M
Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
BIOCHEMICAL &CHEMICAL TRAINING FOR CANCER RESEARCHT32CA009582 · NCI · VANDERBILT UNIVERSITY · PI David K Cortez · 1987 to 2026
$8.8M
The XPA scaffold protein in Nucleotide Excision RepairR01CA218315 · NCI · VANDERBILT UNIVERSITY · PI WALTER J. CHAZIN · 2018 to 2026
$3.4M
Synthesis, Structure and Repair of DNA Interstrand CrosslinksR01CA165911 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI SCHARER, ORLANDO D. · 2012 to 2016
$1.6M
Console upgrades for biological NMR spectrometersS10RR025677 · NCRR · VANDERBILT UNIVERSITY · PI SANDERS, CHARLES R · 2009 to 2009
$460k
NanoTemper Monolith NT.115 Microscale Thermophoresis (MST) instrumentS10OD021483 · OD · VANDERBILT UNIVERSITY · PI SPILLER, BENJAMIN W · 2016 to 2016
$136k
The effect of cancer-associated missense mutations in XPA on nucleotide excision repair activity and platinum-based chemotherapy responseF32CA250258 · NCI · VANDERBILT UNIVERSITY · PI BLEE, ALEXANDRA M · 2020 to 2021
$109k
NCI NIH HHS F32 CA250258NCI NIH HHS P01 CA092584NCI NIH HHS P30 CA068485NCI NIH HHS R01 CA165911NCI NIH HHS R01 CA218315NCI NIH HHS T32 CA009582NCRR NIH HHS S10 RR025677
6 · The paper itself

Abstract

Nucleotide excision repair (NER) reduces efficacy of treatment with platinum (Pt)-based chemotherapy by removing Pt lesions from DNA. Previous study has identified that missense mutation or loss of the NER genes Excision Repair Cross Complementation Group 1 and 2 (

Identifiers

PMID38500596
PMCPMC10946055
OpenAlexW4393100359

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.