Evidence map›Paper›PMID 38500504›Full record

ArticleFrontiers in cellular and infection microbiology2024

Detection of infectious SARS-CoV-2 in ocular samples is linked to viral load in the nasopharynx.

Janine Kimpel, Annika Rössler, David Bante, Wegene Borena, Dorothee von Laer, Claus Zehetner, Teresa Rauchegger, Stefanie Seiwald, Barbara Falkensammer

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Janine Kimpel *Institute of Virology, Medical University of Innsbruck, Innsbruck, Austria.
Annika Rössler *Institute of Virology, Medical University of Innsbruck, Innsbruck, Austria.
David BanteInstitute of Virology, Medical University of Innsbruck, Innsbruck, Austria.
Wegene BorenaInstitute of Virology, Medical University of Innsbruck, Innsbruck, Austria.
Dorothee von LaerInstitute of Virology, Medical University of Innsbruck, Innsbruck, Austria.
Claus ZehetnerDepartment of Ophthalmology, Medical University of Innsbruck, Innsbruck, Austria.
Teresa RaucheggerDepartment of Ophthalmology, Medical University of Innsbruck, Innsbruck, Austria.
Stefanie SeiwaldDepartment of Internal Medicine III, Medical University of Innsbruck, Innsbruck, Austria.
Barbara FalkensammerInstitute of Virology, Medical University of Innsbruck, Innsbruck, Austria.
Innsbruck Medical University · ATUniversität Innsbruck · ATBeth Israel Deaconess Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: SARS-CoV-2 is known to infect respiratory tissue cells. However, less is known about infection of ocular tissue and potential infectivity of lacrimal fluid. With this study, we want to compare viral loads in eye and nasopharyngeal swabs and analyze these for infectious virus. Methods: Between May 2020 and April 2021 ocular and nasopharyngeal swabs were collected from 28 SARS-CoV-2 infected patients treated on the corona virus disease 2019 (COVID-19)-ward of the University Hospital of Innsbruck, Austria. Samples with PCR detectable SARS-CoV-2 were analyzed via whole genome sequencing and an attempt was made to isolate infectious virus. Results: At the time point of sample collection, 22 individuals were still PCR positive in nasopharyngeal samples and in 6 of these patients one or both ocular samples were additionally positive. CT-values in eyes were generally higher compared to corresponding nasopharyngeal samples and we observed a tendency for lower CT-values, i.e. increased viral load, in nasopharyngeal swabs of individuals with at least one infected eye, compared to those where ocular samples were PCR negative. Ocular and nasopharyngeal sequences from the same patient were assigned to the same variant, either the D614G or the Alpha variant. Infectious virus was successfully isolated from 9 nasopharyngeal swabs, however only from one of the seven PCR positive ocular samples. Conclusion: We could detect SARS-CoV-2 in eyes of some of the infected patients albeit at lower levels compared to nasopharyngeal swabs. However, our results also indicate that lacrimal fluid might be infectious in patients with high viral load.

Indexed as

COVID-19SARS-CoV-2HumansNasopharynxRNA, ViralSpecimen HandlingViral LoadRNA, ViralCOVID-19nasopharyngeal swabocular swabocular transmissionOxford Nanopore TechnologySARS-CoV-2virus culturewhole genome sequencing

Identifiers

PMID38500504
PMCPMC10946250
OpenAlexW4392377451

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.