Evidence map›Paper›PMID 38500084›Full record

ArticleBMC genomics2024

Phylogeny and expression patterns of ERF genes that are potential reproductive inducers in hybrid larch.

Junfei Hao, Daixi Xu, Chen Wang, Qing Cao, Qingrong Zhao, Miaomiao Xie, Hanguo Zhang, Lei Zhang

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Junfei HaoState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, 150040, Harbin, China.
Daixi XuState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, 150040, Harbin, China.
Chen WangState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, 150040, Harbin, China.
Qing CaoState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, 150040, Harbin, China.
Qingrong ZhaoState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, 150040, Harbin, China.
Miaomiao XieState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, 150040, Harbin, China.
Hanguo ZhangState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, 150040, Harbin, China. hanguozhang1@sina.com.
Lei ZhangState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, 150040, Harbin, China. zhanglei@nefu.edu.cn.
Northeast Forestry University · CN

Funding

National Key Research and Development Program of China 2022YFD22003020202
6 · The paper itself

Abstract

backgroundLarch is an important component of northern forests and a major cultivated tree species in restoration of forest cover using improved seed material. In recent years, the continuous low seed production has severely affected the production of improved variety seedlings and natural regeneration. However, research on the reproductive growth of gymnosperms is extremely scarce.

resultsIn this study, based on differential transcriptome analysis of two asexual reproductive phases, namely high-yield and low-yield, we further screened 5 ERF family genes that may affect the reproductive development of larch. We analyzed their genetic relationships and predicted their physicochemical properties. The expression patterns of these genes were analyzed in different tissues, developmental stages, hormone treatments, and environmental conditions in hybrid larch.

conclusionThe results showed that all 5 genes were induced by low temperature and ABA, and their expression patterns in different tissues suggested a suppressive role in the development of female cones in larch. Among them, LkoERF3-like1 and LkoERF071 may be involved in the flowering age pathway. This study enriches the scarce research on reproductive development in gymnosperms and provides a theoretical basis and research direction for regulating the reproductive development of larch in seed orchards.

Indexed as

LarixForestsPhylogenyReproductionTreesERF familyLarchPhylogenetic analysisReproductive development

Identifiers

PMID38500084
PMCPMC10946173
OpenAlexW4392913043

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.