Evidence map›Paper›PMID 38498132›Full record

ArticleInternational journal of computer assisted radiology and surgery2024

Anatomical attention can help to segment the dilated pancreatic duct in abdominal CT.

Chen Shen, Holger R Roth, Yuichiro Hayashi, Masahiro Oda, Gen Sato, Tadaaki Miyamoto, Daniel Rueckert, Kensaku Mori

Open access · hybridAbstract read
In one paragraph

Article in International journal of computer assisted radiology and surgery, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Chen ShenGraduate School of Informatics, Nagoya University, Furo-cho, Nagoya, Aichi, 4648601, Japan.ORCID http://orcid.org/0000-0001-8284-9048
Holger R RothNVIDIA Corporation, San Tomas Expy, Santa Clara, CA, 95051, USA.ORCID http://orcid.org/0000-0002-3662-8743
Yuichiro HayashiGraduate School of Informatics, Nagoya University, Furo-cho, Nagoya, Aichi, 4648601, Japan.
Masahiro OdaGraduate School of Informatics, Nagoya University, Furo-cho, Nagoya, Aichi, 4648601, Japan.ORCID http://orcid.org/0000-0001-7714-422X
Gen SatoChiba Kensei Hospital, Makuhari-cho, Chiba, Chiba, 2620032, Japan.
Tadaaki MiyamotoChiba Kensei Hospital, Makuhari-cho, Chiba, Chiba, 2620032, Japan.
Daniel RueckertDepartment of Computing, Imperial College London, Exhibition Road, London, SW7 2AZ, UK.
Kensaku MoriGraduate School of Informatics, Nagoya University, Furo-cho, Nagoya, Aichi, 4648601, Japan. kensaku@is.nagoya-u.ac.jp.ORCID http://orcid.org/0000-0002-0100-4797
Nagoya University · JPKensei Hospital · JPNational Institute of Informatics · JPNvidia (United States) · USTUM Klinikum · DE

Funding

Japan Science and Technology Agency JPMJCR20D5Japan Society for the Promotion of Science 21K19898Japan Society for the Promotion of Science 894030Moonshot Research and Development Program JPMJMS2033Moonshot Research and Development Program JPMJMS2214
6 · The paper itself

Abstract

purposePancreatic duct dilation is associated with an increased risk of pancreatic cancer, the most lethal malignancy with the lowest 5-year relative survival rate. Automatic segmentation of the dilated pancreatic duct from contrast-enhanced CT scans would facilitate early diagnosis. However, pancreatic duct segmentation poses challenges due to its small anatomical structure and poor contrast in abdominal CT. In this work, we investigate an anatomical attention strategy to address this issue.

methodsOur proposed anatomical attention strategy consists of two steps: pancreas localization and pancreatic duct segmentation. The coarse pancreatic mask segmentation is used to guide the fully convolutional networks (FCNs) to concentrate on the pancreas' anatomy and disregard unnecessary features. We further apply a multi-scale aggregation scheme to leverage the information from different scales. Moreover, we integrate the tubular structure enhancement as an additional input channel of FCN.

resultsWe performed extensive experiments on 30 cases of contrast-enhanced abdominal CT volumes. To evaluate the pancreatic duct segmentation performance, we employed four measurements, including the Dice similarity coefficient (DSC), sensitivity, normalized surface distance, and 95 percentile Hausdorff distance. The average DSC achieves 55.7%, surpassing other pancreatic duct segmentation methods on single-phase CT scans only.

conclusionsWe proposed an anatomical attention-based strategy for the dilated pancreatic duct segmentation. Our proposed strategy significantly outperforms earlier approaches. The attention mechanism helps to focus on the pancreas region, while the enhancement of the tubular structure enables FCNs to capture the vessel-like structure. The proposed technique might be applied to other tube-like structure segmentation tasks within targeted anatomies.

Indexed as

AbdomenImage Processing, Computer-AssistedHumansPancreasPancreatic DuctsTomography, X-Ray ComputedAnatomical attentionDilated pancreatic ductPancreatic duct segmentationTubular structure enhancement

Identifiers

PMID38498132
PMCPMC10972935
OpenAlexW4392911570

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.