Evidence map›Paper›PMID 38498053›Full record

ArticleApplied microbiology and biotechnology2024

Characterization of the ADP-β-D-manno-heptose biosynthetic enzymes from two pathogenic Vibrio strains.

Zhaoxiang Shi, Yue Tang, Zhenyi Wang, Min Wang, Zijian Zhong, Jingming Jia, Yihua Chen

Open access · goldAbstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
3.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Zhaoxiang Shi *School of Traditional Chinese Materia Medica, Shenyang Pharmaceutical University, Shenyang, 117004, China.
Yue Tang *State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Zhenyi WangRDFZ Xishan School, Beijing, 100193, China.
Min WangSchool of Biotechnology and Health Sciences, Wuyi University, Jiangmen, 529020, China.
Zijian ZhongState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
Jingming JiaSchool of Traditional Chinese Materia Medica, Shenyang Pharmaceutical University, Shenyang, 117004, China.
Yihua ChenState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China. chenyihua@im.ac.cn.ORCID http://orcid.org/0000-0002-9862-182X
Chinese Academy of Sciences · CNShenyang Pharmaceutical University · CNMicrobiology Institute of Shaanxi · CNWuyi University · CN

Funding

Chinese Academy of Sciences 079GJHZ2022033GCChinese Academy of Sciences KFJ-BRP-009National Key Research and Development Program of China 2021YFC2301000National Natural Science Foundation of China 32025002
6 · The paper itself

Abstract

ADP-activated β-D-manno-heptoses (ADP-β-D-manno-heptoses) are precursors for the biosynthesis of the inner core of lipopolysaccharide in Gram-negative bacteria. Recently, ADP-D-glycero-β-D-manno-heptose (ADP-D,D-manno-heptose) and its C-6'' epimer, ADP-L-glycero-β-D-manno-heptose (ADP-L,D-manno-heptose), were identified as potent pathogen-associated molecular patterns (PAMPs) that can trigger robust innate immune responses. Although the production of ADP-D,D-manno-heptose has been studied in several different pathogenic Gram-negative bacteria, current knowledge of ADP-β-D-manno-heptose biosynthesis in Vibrio strains remains limited. Here, we characterized the biosynthetic enzymes of ADP-D,D-manno-heptose and the epimerase that converts it to ADP-L,D-manno-heptose from Vibrio cholerae (the causative agent of pandemic cholera) and Vibrio parahaemolyticus (non-cholera pathogen causing vibriosis with clinical manifestations of gastroenteritis and wound infections) in comparison with their isozymes from Escherichia coli. Moreover, we discovered that β-D-mannose 1-phosphate, but not α-D-mannose 1-phosphate, could be activated to its ADP form by the nucleotidyltransferase domains of bifunctional kinase/nucleotidyltransferases HldE

Indexed as

Escherichia coliVibrioImmunity, InnateKineticsNucleotidyltransferasesNucleotidyltransferasesADP-β-d-manno-heptose biosynthesisKinetic analysisLipopolysaccharideNucleotidyltransferaseVibrio strains

Identifiers

PMID38498053
PMCPMC10948575
OpenAlexW4392917106

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.