Evidence map›Paper›PMID 38496213›Full record

ArticleGigaByte (Hong Kong, China)2024

Julearn: an easy-to-use library for leakage-free evaluation and inspection of ML models.

Sami Hamdan, Shammi More, Leonard Sasse, Vera Komeyer, Kaustubh R Patil, Federico Raimondo, Alzheimer’s Disease Neuroimaging Initiative

Open access · goldAbstract read
In one paragraph

Article in GigaByte (Hong Kong, China), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Sami HamdanInstitute of Neuroscience and Medicine (INM-7: Brain and Behaviour), Research Centre Jülich, Germany.ORCID https://orcid.org/0000-0001-5072-542X
Shammi MoreInstitute of Neuroscience and Medicine (INM-7: Brain and Behaviour), Research Centre Jülich, Germany.ORCID https://orcid.org/0000-0002-1272-217X
Leonard SasseInstitute of Neuroscience and Medicine (INM-7: Brain and Behaviour), Research Centre Jülich, Germany.ORCID https://orcid.org/0000-0002-2400-3404
Vera KomeyerInstitute of Neuroscience and Medicine (INM-7: Brain and Behaviour), Research Centre Jülich, Germany.ORCID https://orcid.org/0000-0001-9486-0922
Kaustubh R PatilInstitute of Neuroscience and Medicine (INM-7: Brain and Behaviour), Research Centre Jülich, Germany.ORCID https://orcid.org/0000-0002-0289-5480
Federico RaimondoInstitute of Neuroscience and Medicine (INM-7: Brain and Behaviour), Research Centre Jülich, Germany.ORCID https://orcid.org/0000-0003-4087-8259
Alzheimer’s Disease Neuroimaging Initiative
Brain (Germany) · DE

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
NIA NIH HHS U01 AG024904
6 · The paper itself

Abstract

The fast-paced development of machine learning (ML) and its increasing adoption in research challenge researchers without extensive training in ML. In neuroscience, ML can help understand brain-behavior relationships, diagnose diseases and develop biomarkers using data from sources like magnetic resonance imaging and electroencephalography. Primarily, ML builds models to make accurate predictions on unseen data. Researchers evaluate models' performance and generalizability using techniques such as cross-validation (CV). However, choosing a CV scheme and evaluating an ML pipeline is challenging and, if done improperly, can lead to overestimated results and incorrect interpretations. Here, we created julearn, an open-source Python library allowing researchers to design and evaluate complex ML pipelines without encountering common pitfalls. We present the rationale behind julearn's design, its core features, and showcase three examples of previously-published research projects. Julearn simplifies the access to ML providing an easy-to-use environment. With its design, unique features, simple interface, and practical documentation, it poses as a useful Python-based library for research projects.

Identifiers

PMID38496213
PMCPMC10940896
OpenAlexW4392557862

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.