Evidence map›Paper›PMID 38493175›Full record

ArticlePlant methods2024

Profiling of 1-aminocyclopropane-1-carboxylic acid and selected phytohormones in Arabidopsis using liquid chromatography-tandem mass spectrometry.

Michal Karady, Pavel Hladík, Kateřina Cermanová, Petra Jiroutová, Ioanna Antoniadi, Rubén Casanova-Sáez, Karin Ljung, Ondřej Novák

Open access · goldAbstract read
In one paragraph

Article in Plant methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
10.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Single-Cell/Nucleus RNA-Sequencing for Phytohormone Signaling in Plants.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Michal KaradyLaboratory of Growth Regulators, Institute of Experimental Botany, Palacký University, The Czech Academy of Sciences & Faculty of Science, Olomouc, CZ-783 71, Czechia. michal.karady@upol.cz.
Pavel HladíkLaboratory of Growth Regulators, Institute of Experimental Botany, Palacký University, The Czech Academy of Sciences & Faculty of Science, Olomouc, CZ-783 71, Czechia.
Kateřina CermanováLaboratory of Growth Regulators, Institute of Experimental Botany, Palacký University, The Czech Academy of Sciences & Faculty of Science, Olomouc, CZ-783 71, Czechia.
Petra JiroutováLaboratory of Growth Regulators, Institute of Experimental Botany, Palacký University, The Czech Academy of Sciences & Faculty of Science, Olomouc, CZ-783 71, Czechia.
Ioanna AntoniadiDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre (UPSC), Swedish University of Agricultural Sciences, Umeå, SE-901 83, Sweden.
Rubén Casanova-SáezDepartment of Plant Physiology, Umeå Plant Science Centre (UPSC), Umeå University, Umeå, SE-901 87, Sweden.
Karin LjungDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre (UPSC), Swedish University of Agricultural Sciences, Umeå, SE-901 83, Sweden.
Ondřej NovákLaboratory of Growth Regulators, Institute of Experimental Botany, Palacký University, The Czech Academy of Sciences & Faculty of Science, Olomouc, CZ-783 71, Czechia.
Palacký University Olomouc · CZUmeå Plant Science Centre · SECzech Academy of Sciences, Institute of Experimental Botany · CZSwedish University of Agricultural Sciences · SE

Funding

Grantová Agentura České Republiky 20-25948YHorizon 2020 862858Univerzita Palackého v Olomouci IGA_PrF_2023_031
6 · The paper itself

Abstract

backgroundGaseous phytohormone ethylene levels are directly influenced by the production of its immediate non-volatile precursor 1-aminocyclopropane-1-carboxylic acid (ACC). Owing to the strongly acidic character of the ACC molecule, its quantification has been difficult to perform. Here, we present a simple and straightforward validated method for accurate quantification of not only ACC levels, but also major members of other important phytohormonal classes - auxins, cytokinins, jasmonic acid, abscisic acid and salicylic acid from the same biological sample.

resultsThe presented technique facilitates the analysis of 15 compounds by liquid chromatography coupled with tandem mass spectrometry. It was optimized and validated for 10 mg of fresh weight plant material. The extraction procedure is composed of a minimal amount of necessary steps. Accuracy and precision were the basis for evaluating the method, together with process efficiency, recovery and matrix effects as validation parameters. The examined compounds comprise important groups of phytohormones, their active forms and some of their metabolites, including six cytokinins, four auxins, two jasmonates, abscisic acid, salicylic acid and 1-aminocyclopropane-1-carboxylic acid. The resulting method was used to examine their contents in selected Arabidopsis thaliana mutant lines.

conclusionThis profiling method enables a very straightforward approach for indirect ethylene study and explores how it interacts, based on content levels, with other phytohormonal groups in plants.

Indexed as

1-aminocyclopropane-1-carboxylic acidAbscisic acidACCArabidopsisAuxinCytokininEthyleneJasmonic acidLiquid chromatographyMass spectrometryPlant hormonesSalicylic acid

Identifiers

PMID38493175
PMCPMC10943774
OpenAlexW4392883107

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.