Evidence map›Paper›PMID 38492088›Full record

ArticleArchives of virology2024

Complete genome sequence of a novel dsRNA virus from the phytopathogenic fungus Fusarium oxysporum.

Jing Wang, Yunxia Ni, Hui Zhao, Xintao Liu, Rui Qiu, Shujun Li, Hongyan Liu

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jing WangInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, Henan Province, People's Republic of China.ORCID http://orcid.org/0000-0001-8247-6085
Yunxia NiInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, Henan Province, People's Republic of China.
Hui ZhaoInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, Henan Province, People's Republic of China.
Xintao LiuInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, Henan Province, People's Republic of China.
Rui QiuInstitute of Tobacco, Henan Academy of Agricultural Sciences, Key Laboratory for Green Preservation & Control of Tobacco Diseases and Pest in Huanghuai Growing Area, Zhengzhou, 450002, Henan Province, People's Republic of China.
Shujun LiInstitute of Tobacco, Henan Academy of Agricultural Sciences, Key Laboratory for Green Preservation & Control of Tobacco Diseases and Pest in Huanghuai Growing Area, Zhengzhou, 450002, Henan Province, People's Republic of China. 13603749396@126.com.
Hongyan LiuInstitute of Plant Protection, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, Henan Province, People's Republic of China. liuhy1219@163.com.
Henan Academy of Agricultural Sciences · CNTobacco Research Institute · CN

Funding

Agriculture Research System of China CARS-14Henan Provincial Science and Technology Research Project 232102110021Joint Fund of Science and Technology R&D Program of Henan Province 232301420117Major science and technology projects 110202101051(LS-11)
6 · The paper itself

Abstract

Fusarium oxysporum is a widespread plant pathogen that causes fusarium wilt and fusarium root rot in many economically significant crops. Here, a novel dsRNA virus tentatively named "Fusarium oxysporum virus 1" (FoV1) was identified in F. oxysporum strain 3S-18. The genome of FoV1 is 2,944 nucleotides (nt) in length and contains two non-overlapping open reading frames (ORF1 and 2). The larger of these, ORF2, encodes an RNA-dependent RNA polymerase (RdRp) of 590 amino acids with a molecular mass of 67.52 kDa. ORF1 encodes a putative nucleocapsid protein consisting of 134 amino acids with a molecular mass of 34.25 kDa. The RdRp domain of FoV1 shares 60.00% to 84.24% sequence identity with non-segmented dsRNA viruses. Phylogenetic analysis further suggested that FoV1 is a new member of the proposed genus "Unirnavirus" accommodating unclassified monopartite dsRNA viruses.

Indexed as

Fungal VirusesFusariumRNA VirusesAmino AcidsDouble Stranded RNA VirusesFungiGenome, ViralOpen Reading FramesPhylogenyRNA-Dependent RNA PolymeraseRNA, Double-StrandedRNA, ViralAmino AcidsRNA-Dependent RNA PolymeraseRNA, Double-StrandedRNA, Viral

Identifiers

PMID38492088
OpenAlexW4392882346

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.