Evidence map›Paper›PMID 38491992›Full record

ArticleMolecular biology reports2024

High carriage of plasmid-mediated quinolone resistance (PMQR) genes by ESBL-producing and fluoroquinolone-resistant Escherichia coli recovered from animal waste dumps.

Elizabeth Omokoshi Joel, Olabisi Comfort Akinlabi, Adedolapo Victoria Olaposi, Temitayo Omotunde Olowomofe, Abimbola Olumide Adekanmbi

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Article in Molecular biology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Elizabeth Omokoshi JoelDepartment of Animal Science, Faculty of Agriculture, University of Ibadan, Ibadan, Nigeria.
Olabisi Comfort AkinlabiDepartment of Pharmaceutical Microbiology, Faculty of Pharmacy, University of Ibadan, Ibadan, Nigeria. akinlabi.olabisi@yahoo.com.ORCID http://orcid.org/0000-0001-8510-7189
Adedolapo Victoria OlaposiEnvironmental Microbiology and Biotechnology Laboratory, Department of Microbiology, University of Ibadan, Ibadan, Nigeria.ORCID http://orcid.org/0000-0002-5958-662X
Temitayo Omotunde OlowomofeDepartment of Microbiology, Ekiti State University, Ado-Ekiti, Nigeria.
Abimbola Olumide AdekanmbiEnvironmental Microbiology and Biotechnology Laboratory, Department of Microbiology, University of Ibadan, Ibadan, Nigeria. ao.adekanmbi@ui.edu.ng.ORCID http://orcid.org/0000-0002-2871-1002
University of Ibadan · NGEkiti State University · NG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThere has been a rise in the consumption of fluoroquinolones in human and veterinary medicine recently. This has contributed to the rising incidence of quinolone resistance in bacteria. This study aimed at the determination of the antibiotic resistance profile of ESBL-producing and fluoroquinolone-resistant E. coli (FQEC) isolated from animal waste obtained from the waste dumps of an agricultural farm and their carriage of genes encoding PMQR. METHODS AND

resultsIsolation of ESBL-producing E. coli from animal waste samples was done on CHROMagar ESBL, while presumptive isolates were purified, and identified via the detection of uidA gene. Susceptibility to a panel of ten antibiotics was done using the disc diffusion method, and detection of PMQR genes (qnrA, qnrB, qnrS, aac(6')-lb-cr, qepA and oqxAB) was done using monoplex and duplex PCR. Twenty-five ESBL-producing and FQEC were obtained from the cattle (6), piggery (7) and poultry (12) waste dumps of the farm. There was 100% resistance to cefpodoxime, cefotaxime, enrofloxacin, trimethoprim-sulfamethoxazole and penicillin by the isolates. The resistance to the other antibiotics was streptomycin (48%), ceftazidime (24%), while no isolate resisted amoxicillin-clavulanate and imipenem. The frequencies of PMQR genes detected were; qnrA (96%), oqxAB (96%), qnrB (92%), while  qnrS was detected in 88% (22) of the isolates. Aminoglycoside acetyltransferase (aac(6')-lb-cr) and quinolone efflux pump (qepA) were each detected in 20 (80%) of the isolates.

conclusionsThis study showed that animal wastes disposed indiscriminately into dumps could be a budding 'hotspot' for multidrug resistant, ESBL-producing and fluoroquinolone-resistant E. coli carrying multiple genes encoding resistance to fluoroquinolone antibiotics.

Indexed as

Escherichia coliQuinolonesAnimalsAnti-Bacterial AgentsCattleDrug Resistance, BacterialDrug Resistance, Multiple, BacterialFluoroquinolonesHumansMicrobial Sensitivity TestsPlasmidsAnti-Bacterial AgentsFluoroquinolonesQuinolonesESBL-producing E. coliFluoroquinolone-resistant E. coli (FQEC)Plasmid-mediated quinolone resistanceWaste dumps

Identifiers

PMID38491992
OpenAlexW4392879717

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.