Evidence map›Paper›PMID 38491952›Full record

ArticleJournal of insect science (Online)2024

Comparative transcriptomic and metabolomics analysis of modified atmosphere responses in Tribolium castaneum (Coleoptera: Tenebrionidae).

Min Zhou, Biying Pan, Liwen Guan, Yuanyuan Wang, Kangkang Xu, Shigui Wang, Bin Tang, Can Li

Open access · goldAbstract read
In one paragraph

Article in Journal of insect science (Online), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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  6. The Role ofInsects · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Min ZhouKey Laboratory of Surveillance and Management of Invasive Alien Species in Guizhou Education Department, Department of Biology and Engineering of Environment, Guiyang University, Guiyang 550005, PR China.
Biying PanCollege of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, PR China.
Liwen GuanCollege of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, PR China.
Yuanyuan WangKey Laboratory of Surveillance and Management of Invasive Alien Species in Guizhou Education Department, Department of Biology and Engineering of Environment, Guiyang University, Guiyang 550005, PR China.
Kangkang XuKey Laboratory of Surveillance and Management of Invasive Alien Species in Guizhou Education Department, Department of Biology and Engineering of Environment, Guiyang University, Guiyang 550005, PR China.
Shigui WangCollege of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, PR China.
Bin TangKey Laboratory of Surveillance and Management of Invasive Alien Species in Guizhou Education Department, Department of Biology and Engineering of Environment, Guiyang University, Guiyang 550005, PR China.ORCID 0000-0002-6790-7753
Can LiKey Laboratory of Surveillance and Management of Invasive Alien Species in Guizhou Education Department, Department of Biology and Engineering of Environment, Guiyang University, Guiyang 550005, PR China.ORCID 0000-0002-4724-1704
Guiyang University · CNHangzhou Normal University · CN

Funding

Academician Workstation of Guiyang University, Guizhou Province [2019] 5605Discipline and Master's Site Construction Project of Guiyang University by Guiyang City Financial Support Guiyang University [2022-xk]Guiyang Science and Technology Planning Project [2022] 5-20Innovation Group Project of Education Department of Guizhou Province (2021)013National Natural Science Foundation of China 31960542Program for Natural Science Research in Guizhou Education Department QJJ[2023]024Special Funding of Guiyang Science and Technology Bureau and Guiyang University GYU-KY-[2021]
6 · The paper itself

Abstract

Modified atmosphere is effective in controlling Tribolium castaneum Herbst, but it has adaptations. Comprehending the potential mechanism of resistance to T. castaneum in a modified atmosphere will help advance related management methods. This study conducted a comparative transcriptomic and metabolomic analysis to understand the physiological mechanism of T. castaneum in adapting to CO2 stress. Results showed that there were a large number of differentially expressed genes (DEGs) in T. castaneum treated with different concentrations of CO2. Gene ontology (GO) analysis revealed significant enrichment of DEGs mainly in binding, catalytic activity, cell, membrane, membrane part, protein-containing complex, biological regulation, and cellular and metabolic process. Kyoto Encyclopedia of Genes and Genomes analysis showed that different treatments had different effects on the metabolic pathways of T. castaneum. DEGs induced by 25% CO2 were involved in arginine and proline metabolism, and 50% air + 50% CO2 treatment affected most kinds of metabolic pathways, mainly the signal transduction pathway, including PI3K-Akt signaling pathway, AMPK signaling pathway, neurotrophin signaling pathway, insulin signaling pathway, and thyroid hormone signaling. Ribosome and DNA replication were enriched under high CO2 stress (75% and 95%). The metabolomics revealed that different concentrations of CO2 treatments might inhibit the growth of T. castaneum through acidosis, or they may adapt to anoxic conditions through histamine and N-acetylhistamine. Multiple analyses have shown significant changes in histamine and N-acetylhistamine levels, as well as their associated genes, with increasing CO2 concentration. In conclusion, this study comprehensively revealed the molecular mechanism of T. castaneum responding to CO2 stress and provided the basis for an effectively modified atmosphere in the T. castaneum.

Indexed as

ColeopteraTriboliumAnimalsCarbon DioxideGene Expression ProfilingHistaminePhosphatidylinositol 3-KinasesCarbon DioxideHistamineN-acetylhistaminePhosphatidylinositol 3-Kinasesmetabolomicsmodified atmospheretranscriptomicTribolium castaneum

Identifiers

PMID38491952
PMCPMC10944018
OpenAlexW4392888853

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.