ArticleNature genetics2024
Genome assemblies of 11 bamboo species highlight diversification induced by dynamic subgenome dominance.
Article in Nature genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.
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44 citing papers in PubMed.
- Genomic Expansion and Subgenome Expression Divergence of Sugar Transporters During Polyploid Evolution of Bamboos.Biology · 2026Article
- Chromosome-level Streptochaeta genome elucidates the ancestral karyotype and allopolyploid origin of grasses.Nature communications · 2026Article
- Article
- Exploring Genetic Diversity in a Temperate Bamboo: A Study Using SSR Markers.Plants (Basel, Switzerland) · 2026Article
- Bipartite mitogenome of Fargesia angustissima reveals repeat-mediated structural dynamics, inter-organellar DNA transfers, and phylogenetic discordance.BMC plant biology · 2026Article
- Morphological and molecular evidence clarifies the taxonomic position of Indosasa solearis and reveals the hybrid origin of Sinobambusa (Poaceae: Bambusoideae: Arundinarieae).BMC plant biology · 2026Article
- Resequencing of 284 genomes reveals evolutionary history and hotspot of genetic diversity of the giant bamboos.Plant diversity · 2026Article
- Polyploidy and plant resilience to environmental stresses: Molecular mechanisms and future applications.Plant communications · 2026Review
- Using genomic selection to examine subgenome dominance and epistasis in allopolyploid strawberry.The plant genome · 2026Article
- RIFinder reveals widespread adaptive remote introgression in grass genomes.Plant communications · 2026Article
- Genome sequencing, de novo assembly and annotation of the commercially important bamboo, Bambusa tulda Roxb.Scientific data · 2026Article
- Diploid origins and early genome stabilization in the allotetraploid Arabidopsis suecica.The New phytologist · 2026Article
- Multifunctional Bamboo Based Materials Empowered by Multiscale Hierarchical Structures-A Critical Review.Advanced materials (Deerfield Beach, Fla.) · 2026Review
- Phylogeny ofPhytoKeys · 2026Article
- Evolutionary analysis of ascorbate-glutathione cycle genes across green plants with lineage-specific profiling in grapevine (Horticulture research · 2026Article
- Genome-wide identification of theFrontiers in plant science · 2026Article
- Morphological Characteristics of Floral Organs and Their Taxonomic Significance in 23 Species of Bamboo from Southwest China.Plants (Basel, Switzerland) · 2025Article
- A high-quality chromosome-level genome assembly of herbaceous bamboo species Lithachne pauciflora.Scientific data · 2025Article
- Multi-omics approaches investigate the bitter flavor in the shoot of Bambusa oldhamii Munro.BMC plant biology · 2025Article
- A Chromosome-scale Genome Assembly for the Broad-leaved Bamboo Indocalamus tessellatus.Scientific data · 2025Article
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21 authors.
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Abstract
Polyploidy (genome duplication) is a pivotal force in evolution. However, the interactions between parental genomes in a polyploid nucleus, frequently involving subgenome dominance, are poorly understood. Here we showcase analyses of a bamboo system (Poaceae: Bambusoideae) comprising a series of lineages from diploid (herbaceous) to tetraploid and hexaploid (woody), with 11 chromosome-level de novo genome assemblies and 476 transcriptome samples. We find that woody bamboo subgenomes exhibit stunning karyotype stability, with parallel subgenome dominance in the two tetraploid clades and a gradual shift of dominance in the hexaploid clade. Allopolyploidization and subgenome dominance have shaped the evolution of tree-like lignified culms, rapid growth and synchronous flowering characteristic of woody bamboos as large grasses. Our work provides insights into genome dominance in a remarkable polyploid system, including its dependence on genomic context and its ability to switch which subgenomes are dominant over evolutionary time.
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