Evidence map›Paper›PMID 38489352›Full record

ArticleScience immunology2024

Gut bacteria-derived serotonin promotes immune tolerance in early life.

Katherine Z Sanidad, Stephanie L Rager, Hannah C Carrow, Aparna Ananthanarayanan, Ryann Callaghan, Lucy R Hart, Tingting Li, Purnima Ravisankar, Julia A Brown, Mohammed Amir and 10 more

Open access · greenAbstract read
In one paragraph

Article in Science immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
17.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 76 citations in OpenAlex.

  1. Review
  2. Article
  3. T-betThe FEBS journal · 2026
    Article
  4. Article
  5. Review
  6. [Gut microbiota and allergic diseases].Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2026
    Review
  7. Immune development in early life.Nature immunology · 2026
    Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Health benefits ofFrontiers in microbiology · 2026
    Review
  15. Review
  16. Review
  17. Review
  18. Review
  19. Review
  20. Review

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 1 country.

Katherine Z SanidadGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0002-2689-3826
Stephanie L RagerDepartment of Pediatrics, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0003-1016-6138
Hannah C CarrowGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0003-0463-0811
Aparna AnanthanarayananGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0003-4776-9952
Ryann CallaghanImmunology and Microbial Pathogenesis Program, Weill Cornell Graduate School, New York, NY 10065, USA.ORCID 0000-0003-2143-787X
Lucy R HartGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0009-0006-0836-2358
Tingting LiJill Roberts Institute for Inflammatory Bowel Disease, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0002-2303-6394
Purnima RavisankarGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.
Julia A BrownGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0002-9172-069X
Mohammed AmirGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0003-4003-3600
Jenny C JinGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.
Alexandria Rose SavageDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY 10065, USA.
Ryan LuoGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.
Florencia Mardorsky RowdoEnglander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0002-8504-1690
M Laura MartinEnglander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0001-9359-5856
Randi B SilverDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0009-0006-5292-1188
Chun-Jun GuoJill Roberts Institute for Inflammatory Bowel Disease, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0002-7227-4591
Jan KrumsiekInstitute for Computational Biomedicine, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0003-4734-3791
Naohiro InoharaRogel Cancer Center, University of Michigan, Ann Arbor, MI 48109, USA.ORCID 0000-0002-4215-9349
Melody Y ZengGale and Ira Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY 10065, USA.ORCID 0000-0002-0031-4267
Cornell University · USUniversity of Michigan · US

Funding

Disparities in COVID Disease Severity and Outcomes in New York CityUL1TR002384 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI JULIANNE L IMPERATO-MCGINLEY · 2017 to 2026
$86.2M
Institutional Career Development CoreKL2TR002385 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI YUAN-SHAN ZHU · 2017 to 2026
$13.3M
J. NRSA Training CoreTL1TR002386 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI Genevieve Giny Fouda Amou ou · 2017 to 2026
$5.8M
Microbiota-derived metabolites and the regulation of host immunity and inflammation (Diversity Supplement)R01AI172027 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI David Artis, Chun-Jun Guo · 2022 to 2026
$4.4M
Dietary Regulation of Intestinal Inflammation and RepairR01DK132244 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI ARTIS, DAVID, GUO, CHUN-JUN · 2022 to 2025
$2.7M
Megakaryocyte regulation by the gut microbiomeR01HL169989 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI Melody Y Zeng · 2023 to 2026
$2.6M
An integrative and generalizable approach to modulate microbiota small molecules in the hostDP2HD101401 · NICHD · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUO, CHUN-JUN · 2019 to 2019
$2.5M
Multidisciplinary Research Training in Gastroenterology and HepatologyT32DK116970 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI Randy S Longman · 2019 to 2026
$2.3M
Molecular mechanisms behind microbiota regulation of host amino acid and glucose homeostasisR01DK135816 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI Chun-Jun Guo · 2023 to 2026
$1.9M
Immune regulation by the gut microbiome at the maternal-fetal interfaceR01HD110118 · NICHD · WEILL MEDICAL COLL OF CORNELL UNIV · PI ZENG, MELODY Y · 2022 to 2024
$1.3M
Role of gut microbiota-induced IgG in enteric host defenseK01DK114376 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI ZENG, MELODY Y · 2018 to 2022
$758k
Dissecting the interplay between immunoglobulin G and the gut microbiome in cancer progression and metastasisR21CA270998 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI MATEI, IRINA, ZENG, MELODY Y · 2023 to 2024
$426k
NCATS NIH HHS KL2 TR002385NCATS NIH HHS TL1 TR002386NCATS NIH HHS UL1 TR002384NCI NIH HHS R21 CA270998NHLBI NIH HHS R01 HL169989NIAID NIH HHS R01 AI172027NICHD NIH HHS DP2 HD101401NICHD NIH HHS F32 HD112151NICHD NIH HHS R01 HD110118NIDDK NIH HHS K01 DK114376NIDDK NIH HHS R01 DK132244NIDDK NIH HHS R01 DK135816NIDDK NIH HHS T32 DK116970
6 · The paper itself

Abstract

The gut microbiota promotes immune system development in early life, but the interactions between the gut metabolome and immune cells in the neonatal gut remain largely undefined. Here, we demonstrate that the neonatal gut is uniquely enriched with neurotransmitters, including serotonin, and that specific gut bacteria directly produce serotonin while down-regulating monoamine oxidase A to limit serotonin breakdown. We found that serotonin directly signals to T cells to increase intracellular indole-3-acetaldehdye and inhibit mTOR activation, thereby promoting the differentiation of regulatory T cells, both ex vivo and in vivo in the neonatal intestine. Oral gavage of serotonin into neonatal mice resulted in long-term T cell-mediated antigen-specific immune tolerance toward both dietary antigens and commensal bacteria. Together, our study has uncovered an important role for specific gut bacteria to increase serotonin availability in the neonatal gut and identified a function of gut serotonin in shaping T cell response to dietary antigens and commensal bacteria to promote immune tolerance in early life.

Indexed as

Gastrointestinal MicrobiomeSerotoninAnimalsAntigensBacteriaImmune ToleranceMiceAntigensSerotonin

Identifiers

PMID38489352
PMCPMC11328322
OpenAlexW4392857137

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.