Evidence map›Paper›PMID 38487927›Full record

ReviewChembiochem : a European journal of chemical biology2024

Natural Products That Contain Higher Homologated Amino Acids.

Skyler L Owens, Shopno R Ahmed, Rebecca M Lang Harman, Laura E Stewart, Shogo Mori

Open access · bronzeAbstract readReview
In one paragraph

Review in Chembiochem : a European journal of chemical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. German Chamomile (International journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Skyler L OwensDepartment of Chemistry and Biochemistry, Augusta University, 1120 15th Street, Augusta, GA 30912.
Shopno R AhmedDepartment of Chemistry and Biochemistry, Augusta University, 1120 15th Street, Augusta, GA 30912.
Rebecca M Lang HarmanDepartment of Chemistry and Biochemistry, Augusta University, 1120 15th Street, Augusta, GA 30912.
Laura E StewartDepartment of Chemistry and Biochemistry, Augusta University, 1120 15th Street, Augusta, GA 30912.
Shogo MoriDepartment of Chemistry and Biochemistry, Augusta University, 1120 15th Street, Augusta, GA 30912.ORCID 0000-0003-4518-7270
Augusta University · US

Funding

The origins of amino acid selectivity in the homologation pathwayR15GM151721 · NIGMS · AUGUSTA UNIVERSITY · PI MORI, SHOGO · 2023 to 2023
$424k
National Institute of General Medical Sciences of the National Institutes of Health R15 GM151721NIGMS NIH HHS R15 GM151721Summer Scholars Program in the Center for Undergraduate Research and Scholarship at Augusta University
6 · The paper itself

Abstract

This review focuses on discussing natural products (NPs) that contain higher homologated amino acids (homoAAs) in the structure as well as the proposed and characterized biosynthesis of these non-proteinogenic amino acids. Homologation of amino acids includes the insertion of a methylene group into its side chain. It is not a very common modification found in NP biosynthesis as approximately 450 homoAA-containing NPs have been isolated from four bacterial phyla (Cyanobacteria, Actinomycetota, Myxococcota, and Pseudomonadota), two fungal phyla (Ascomycota and Basidiomycota), and one animal phylum (Porifera), except for a few examples. Amino acids that are found to be homologated and incorporated in the NP structures include the following ten amino acids: alanine, arginine, cysteine, isoleucine, glutamic acid, leucine, phenylalanine, proline, serine, and tyrosine, where isoleucine, leucine, phenylalanine, and tyrosine share the comparable enzymatic pathway. Other amino acids have their individual homologation pathway (arginine, proline, and glutamic acid for bacteria), likely utilize the primary metabolic pathway (alanine and glutamic acid for fungi), or have not been reported (cysteine and serine). Despite its possible high potential in the drug discovery field, the biosynthesis of homologated amino acids has a large room to explore for future combinatorial biosynthesis and metabolic engineering purpose.

Indexed as

Amino AcidsBiological ProductsAnimalsBacteriaFungiPoriferaAmino AcidsBiological ProductsAmino acidsBiosynthesisHomologationNatural ProductsPeptides

Identifiers

PMID38487927
PMCPMC11386549
OpenAlexW4392851906

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.