Evidence map›Paper›PMID 38487294›Full record

ArticleHorticulture research2024

NYUS.2: an automated machine learning prediction model for the large-scale real-time simulation of grapevine freezing tolerance in North America.

Hongrui Wang, Gaurav D Moghe, Al P Kovaleski, Markus Keller, Timothy E Martinson, A Harrison Wright, Jeffrey L Franklin, Andréanne Hébert-Haché, Caroline Provost, Michael Reinke and 6 more

Abstract read
In one paragraph

Article in Horticulture research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Hongrui WangSchool of Integrative Plant Science, Horticulture Section, Cornell AgriTech, Cornell University, Geneva, NY 14456, USA.
Gaurav D MogheSchool of Integrative Plant Science, Plant Biology Section, Cornell University, Ithaca, NY 14850, USA.
Al P KovaleskiPlant and Agroecosystem Sciences Department, University of Wisconsin-Madison, Madison, WI 53706, USA.
Markus KellerDepartment of Viticulture and Enology, Irrigated Agriculture Research and Extension Center, Washington State University, Prosser, WA 99350, USA.
Timothy E MartinsonSchool of Integrative Plant Science, Horticulture Section, Cornell AgriTech, Cornell University, Geneva, NY 14456, USA.
A Harrison WrightKentville Research and Development Centre, Agriculture and Agri-Food Canada, Kentville, Nova Scotia, B4N 1J5, Canada.
Jeffrey L FranklinKentville Research and Development Centre, Agriculture and Agri-Food Canada, Kentville, Nova Scotia, B4N 1J5, Canada.
Andréanne Hébert-HachéCentre de Recherche Agroalimentaire de Mirabel, Mirabel, Québec, J7N 2X8, Canada.
Caroline ProvostCentre de Recherche Agroalimentaire de Mirabel, Mirabel, Québec, J7N 2X8, Canada.
Michael ReinkeSouthwest Michigan Research and Extension Center, Michigan State University, Benton Harbor, MI 49022, USA.
Amaya AtuchaPlant and Agroecosystem Sciences Department, University of Wisconsin-Madison, Madison, WI 53706, USA.
Michael G NorthPlant and Agroecosystem Sciences Department, University of Wisconsin-Madison, Madison, WI 53706, USA.
Jennifer P RussoSchool of Integrative Plant Science, Horticulture Section, Cornell AgriTech, Cornell University, Geneva, NY 14456, USA.
Pierre HelwiMartell & Co., 7 place Edouard Martell, Cognac 16100, France.
Michela CentinariDepartment of Plant Science, The Pennsylvania State University, University Park, PA 16802, USA.
Jason P LondoSchool of Integrative Plant Science, Horticulture Section, Cornell AgriTech, Cornell University, Geneva, NY 14456, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accurate and real-time monitoring of grapevine freezing tolerance is crucial for the sustainability of the grape industry in cool climate viticultural regions. However, on-site data are limited due to the complexity of measurement. Current prediction models underperform under diverse climate conditions, which limits the large-scale deployment of these methods. We combined grapevine freezing tolerance data from multiple regions in North America and generated a predictive model based on hourly temperature-derived features and cultivar features using AutoGluon, an automated machine learning engine. Feature importance was quantified by AutoGluon and SHAP (SHapley Additive exPlanations) value. The final model was evaluated and compared with previous models for its performance under different climate conditions. The final model achieved an overall 1.36°C root-mean-square error during model testing and outperformed two previous models using three test cultivars at all testing regions. Two feature importance quantification methods identified five shared essential features. Detailed analysis of the features indicates that the model has adequately extracted some biological mechanisms during training. The final model, named NYUS.2, was deployed along with two previous models as an R shiny-based application in the 2022-23 dormancy season, enabling large-scale and real-time simulation of grapevine freezing tolerance in North America for the first time.

Identifiers

PMID38487294
PMCPMC10939402

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.