Evidence map›Paper›PMID 38486830›Full record

ArticleBiological imaging2022

Automatic classification and neurotransmitter prediction of synapses in electron microscopy.

Angela Zhang, S Shailja, Cezar Borba, Yishen Miao, Michael Goebel, Raphael Ruschel, Kerrianne Ryan, William Smith, B S Manjunath

Erratum issuedAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Biological imaging, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Angela ZhangVision Research Laboratory, University of California, Santa Barbara, Santa Barbara, California, USA.ORCID https://orcid.org/0000-0003-4198-8927
S ShailjaVision Research Laboratory, University of California, Santa Barbara, Santa Barbara, California, USA.ORCID https://orcid.org/0000-0002-5056-9989
Cezar BorbaNeuroscience Research Institute, University of California, Santa Barbara, Santa Barbara, California, USA.
Yishen MiaoNeuroscience Research Institute, University of California, Santa Barbara, Santa Barbara, California, USA.ORCID https://orcid.org/0000-0001-7868-7402
Michael GoebelVision Research Laboratory, University of California, Santa Barbara, Santa Barbara, California, USA.
Raphael RuschelVision Research Laboratory, University of California, Santa Barbara, Santa Barbara, California, USA.
Kerrianne RyanMeinertzhagen Laboratory of Invertebrate Neurobiology, Dalhousie University, Halifax, Nova Scotia, Canada.
William SmithNeuroscience Research Institute, University of California, Santa Barbara, Santa Barbara, California, USA.
B S ManjunathVision Research Laboratory, University of California, Santa Barbara, Santa Barbara, California, USA.

Funding

The connectome and neurobiology of a novel model chordate, Ciona intestinalisR01NS103774 · NINDS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI MANJUNATH, BANGALORE S, SMITH, WILLIAM · 2017 to 2021
$2.8M
NINDS NIH HHS R01 NS103774
6 · The paper itself

Abstract

This paper presents a deep-learning-based workflow to detect synapses and predict their neurotransmitter type in the primitive chordate

Indexed as

Cionacomputer visionelectron microscopy

Identifiers

PMID38486830
PMCPMC10936391

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.