Evidence map›Paper›PMID 38486337›Full record

ArticleGenome biology2024

Multiplex DNA fluorescence in situ hybridization to analyze maternal vs. paternal C. elegans chromosomes.

Silvia Gutnik, Jia Emil You, Ahilya N Sawh, Aude Andriollo, Susan E Mango

Abstract read
In one paragraph

Article in Genome biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Silvia GutnikBiozentrum, University of Basel, 4056, Basel, Switzerland.
Jia Emil YouBiozentrum, University of Basel, 4056, Basel, Switzerland.
Ahilya N SawhBiozentrum, University of Basel, 4056, Basel, Switzerland.
Aude AndriolloBiozentrum, University of Basel, 4056, Basel, Switzerland.
Susan E MangoBiozentrum, University of Basel, 4056, Basel, Switzerland. susan.mango@unibas.ch.ORCID 0000-0002-2146-3237

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
NIH HHS P40 OD010440
6 · The paper itself

Abstract

Recent advances in microscopy have enabled studying chromosome organization at the single-molecule level, yet little is known about inherited chromosome organization. Here we adapt single-molecule chromosome tracing to distinguish two C. elegans strains (N2 and HI) and find that while their organization is similar, the N2 chromosome influences the folding parameters of the HI chromosome, in particular the step size, across generations. Furthermore, homologous chromosomes overlap frequently, but alignment between homologous regions is rare, suggesting that transvection is unlikely. We present a powerful tool to investigate chromosome architecture and to track the parent of origin.

Indexed as

Caenorhabditis elegansChromosomesAnimalsDNAIn Situ Hybridization, FluorescenceDNAChromosome pairingChromosome tracingDNA FISHEmbryoParent-of-origin

Identifiers

PMID38486337
PMCPMC10941459

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.