Evidence map›Paper›PMID 38486280›Full record

ArticleMicrobial cell factories2024

RuBisCO activity assays: a simplified biochemical redox approach for in vitro quantification and an RNA sensor approach for in vivo monitoring.

Muhammad Faisal, Aditya P Sarnaik, Nandini Kannoju, Nima Hajinajaf, Muhammad Javaid Asad, Ryan W Davis, Arul M Varman

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Muhammad Faisal *Chemical Engineering, School for Engineering of Matter, Transport and Energy (SEMTE), Arizona State University, Tempe, AZ, 85281, USA.
Aditya P Sarnaik *Chemical Engineering, School for Engineering of Matter, Transport and Energy (SEMTE), Arizona State University, Tempe, AZ, 85281, USA.
Nandini KannojuChemical Engineering, School for Engineering of Matter, Transport and Energy (SEMTE), Arizona State University, Tempe, AZ, 85281, USA.
Nima HajinajafChemical Engineering, School for Engineering of Matter, Transport and Energy (SEMTE), Arizona State University, Tempe, AZ, 85281, USA.
Muhammad Javaid AsadUniversity Institute of Biochemistry and Biotechnology, PMAS-Arid Agriculture University Rawalpindi, Rawalpindi, 46000, Pakistan.
Ryan W DavisSandia National Laboratories, Livermore, CA, USA.
Arul M VarmanChemical Engineering, School for Engineering of Matter, Transport and Energy (SEMTE), Arizona State University, Tempe, AZ, 85281, USA. Arul.M.Varman@asu.edu.
Arizona State University · USPir Mehr Ali Shah Arid Agriculture University · PKSandia National Laboratories California · US

Funding

Sandia National Laboratories 2122769Sandia's Lab Directed Research and Development (LDRD) program 20-0242U.S. Dept of Energy - BioEnergy Technologies Office through the DICOVR Consortium 32208
6 · The paper itself

Abstract

backgroundRibulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) is the most abundant soluble protein in nature. Extensive studies have been conducted for improving its activity in photosynthesis through approaches like protein engineering. Concurrently, multiple biochemical and radiolabeling assays have been developed for determining its activity. Although these existing assays yield reliable results, they require addition of multiple external components, rendering them less convenient and expensive. Therefore, in this study, we have developed two relatively cheaper, convenient, and easily reproducible assays for quantitative and qualitative estimation of RuBisCO activity.

resultsWe simplified a contemporary NADH based spectrophotometric RuBisCO assay by using cyanobacterial cell lysate as the source for Calvin cycle enzymes. We analyzed the influence of inorganic carbon substrates, CO

conclusionsOverall, we have developed a simplified biochemical assay for monitoring RuBisCO activity and demonstrated that it can provide reliable results as compared to the prior literature. Furthermore, the biochemical assay using 5% CO

Indexed as

Carbon DioxideRibulose-Bisphosphate CarboxylaseBiological AssayCarbonOxidation-ReductionPhotosynthesisCarbonCarbon DioxideRibulose-Bisphosphate CarboxylaseBiosensorCalvin cycleCarbon captureCyanobacteriaFluorometric assayRNA aptamer

Identifiers

PMID38486280
PMCPMC10938803
OpenAlexW4392817443

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.