Evidence map›Paper›PMID 38486161›Full record

ArticleBMC ecology and evolution2024

"Patchiness" in mechanical stiffness across a tumor as an early-stage marker for malignancy.

Zibah Mirzakhel, Gudur Ashrith Reddy, Jennifer Boman, Brianna Manns, Savannah Ter Veer, Parag Katira

Open access · goldAbstract read
In one paragraph

Article in BMC ecology and evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zibah MirzakhelDepartment of Mechanical Engineering, San Diego State University, San Diego, CA, USA.
Gudur Ashrith ReddyDepartment of Mechanical Engineering, San Diego State University, San Diego, CA, USA.
Jennifer BomanDepartment of Mechanical Engineering, San Diego State University, San Diego, CA, USA.
Brianna MannsDepartment of Mechanical Engineering, San Diego State University, San Diego, CA, USA.
Savannah Ter VeerDepartment of Mechanical Engineering, San Diego State University, San Diego, CA, USA.
Parag KatiraDepartment of Mechanical Engineering, San Diego State University, San Diego, CA, USA. pkatira@sdsu.edu.
San Diego State University · USUniversity of California, San Diego · US

Funding

Army Research Office W911NF-17-1-0413
6 · The paper itself

Abstract

Mechanical phenotyping of tumors, either at an individual cell level or tumor cell population level is gaining traction as a diagnostic tool. However, the extent of diagnostic and prognostic information that can be gained through these measurements is still unclear. In this work, we focus on the heterogeneity in mechanical properties of cells obtained from a single source such as a tissue or tumor as a potential novel biomarker. We believe that this heterogeneity is a conventionally overlooked source of information in mechanical phenotyping data. We use mechanics-based in-silico models of cell-cell interactions and cell population dynamics within 3D environments to probe how heterogeneity in cell mechanics drives tissue and tumor dynamics. Our simulations show that the initial heterogeneity in the mechanical properties of individual cells and the arrangement of these heterogenous sub-populations within the environment can dictate overall cell population dynamics and cause a shift towards the growth of malignant cell phenotypes within healthy tissue environments. The overall heterogeneity in the cellular mechanotype and their spatial distributions is quantified by a "patchiness" index, which is the ratio of the global to local heterogeneity in cell populations. We observe that there exists a threshold value of the patchiness index beyond which an overall healthy population of cells will show a steady shift towards a more malignant phenotype. Based on these results, we propose that the "patchiness" of a tumor or tissue sample, can be an early indicator for malignant transformation and cancer occurrence in benign tumors or healthy tissues. Additionally, we suggest that tissue patchiness, measured either by biochemical or biophysical markers, can become an important metric in predicting tissue health and disease likelihood just as landscape patchiness is an important metric in ecology.

Indexed as

NeoplasmsEcologyEnvironmentHumansCancer ecologyCell mechanicsEarly markersLandscape ecologyPhysics of cancerTumor heterogeneityTumor malignancy

Identifiers

PMID38486161
PMCPMC10938681
OpenAlexW4392812288

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.