Evidence map›Paper›PMID 38484975›Full record

SynthesisThe American journal of clinical nutrition2024

Exploiting meta-analysis of genome-wide interaction with serum 25-hydroxyvitamin D to identify novel genetic loci associated with pulmonary function.

Jungkyun Seo, Nathan C Gaddis, Bonnie K Patchen, Jiayi Xu, R Graham Barr, George O'Connor, Ani W Manichaikul, Sina A Gharib, Josée Dupuis, Kari E North and 2 more

Open access · hybridAbstract readMeta-Analysis
In one paragraph

Synthesis in The American journal of clinical nutrition, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 9 institutions in 2 countries.

Jungkyun SeoDepartment of Epidemiology, University of North Carolina, Chapel Hill, NC, United States.
Nathan C GaddisRTI International, Research Triangle Park, NC, United States.
Bonnie K PatchenDivision of Nutritional Sciences, Cornell University, Ithaca, NY, United States.
Jiayi XuDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, United States.
R Graham BarrDivisions of Pulmonary, Allergy, and Critical Care Medicine, Columbia University Medical Center, New York, NY, United States.
George O'ConnorPulmonary Center and Department of Medicine, Boston University School of Medicine, Boston, MA, United States.
Ani W ManichaikulCenter for Public Health Genomics, University of Virginia, Charlottesville, VA, United States.
Sina A GharibCardiovascular Health Research Unit, Department of Medicine, University of Washington, Seattle, WA, United States; Division of Pulmonary, Critical Care and Sleep Medicine, Computational Medicine Core, Center for Lung Biology, University of Washington, Seattle, WA, United States.
Josée DupuisDepartment of Epidemiology, Biostatistics and Occupational Health, McGill University, Montreal, Quebec, Canada.
Kari E NorthDepartment of Epidemiology, University of North Carolina, Chapel Hill, NC, United States.
Patricia A CassanoDivision of Nutritional Sciences, Cornell University, Ithaca, NY, United States; Division of Epidemiology, Department of Population Health Sciences, Weill Cornell Medicine, NY, United States.
Dana B HancockRTI International, Research Triangle Park, NC, United States. Electronic address: dhancock@rti.org.
Cornell University · USRTI International · USUniversity of North Carolina at Chapel Hill · USBoston University · USColumbia University Irving Medical Center · USMcGill University · CAUniversity of Virginia · USUniversity of Washington · USYale University · US

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
NUTRITION TRAININGT32DK007158 · NIDDK · CORNELL UNIVERSITY ITHACA · PI PATRICIA A CASSANO, Julia L. Finkelstein · 1986 to 2026
$7.4M
The Genetic Epidemiology of Heart, Lung, and Blood TraitsTraining Grant (GenHLB)T32HL129982 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Christy Leigh Avery, KAREN L. MOHLKE · 2016 to 2026
$3.8M
Nutritional Omics of Pulmonary Function DeclineR01HL149352 · NHLBI · RESEARCH TRIANGLE INSTITUTE · PI CASSANO, PATRICIA A, HANCOCK, DANA B · 2019 to 2022
$3.1M
Nutritional Genomics of Pulmonary FunctionR21HL125574 · NHLBI · RESEARCH TRIANGLE INSTITUTE · PI CASSANO, PATRICIA A, HANCOCK, DANA B · 2015 to 2016
$473k
NHLBI NIH HHS R01 HL149352NHLBI NIH HHS R21 HL125574NHLBI NIH HHS T32 HL129982NIDDK NIH HHS T32 DK007158NIEHS NIH HHS P30 ES010126
6 · The paper itself

Abstract

backgroundHigher 25-hydroxyvitamin D (25(OH)D) concentrations in serum has a positive association with pulmonary function. Investigating genome-wide interactions with 25(OH)D may reveal new biological insights into pulmonary function.

objectivesWe aimed to identify novel genetic variants associated with pulmonary function by accounting for 25(OH)D interactions.

methodsWe included 211,264 participants from the observational United Kingdom Biobank study with pulmonary function tests (PFTs), genome-wide genotypes, and 25(OH)D concentrations from 4 ancestral backgrounds-European, African, East Asian, and South Asian. Among PFTs, we focused on forced expiratory volume in the first second (FEV

resultsOur GWAS meta-analyses, accounting for interaction with 25(OH)D, revealed 30 genetic variants significantly associated with FEV

conclusionGenetic variant associations with lung function can be modified by 25(OH)D, and smoking history can further modify variant×25(OH)D interactions. These results expand the known genetic architecture of pulmonary function and add evidence that gene-environment interactions, including with 25(OH)D and smoking, influence lung function.

Indexed as

Genome-Wide Association StudyLungRespiratory Function TestsVitamin DForced Expiratory VolumeGenetic LociHumansPolymorphism, Single NucleotideUK BiobankUnited KingdomVital Capacity25-hydroxyvitamin DVitamin Dgene-environment interactiongenome-wide association studylung functionUK Biobankvitamin D

Identifiers

PMID38484975
PMCPMC11130669
OpenAlexW4392699456

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.