Evidence map›Paper›PMID 38484209›Full record

ArticleJCO precision oncology2024

Comprehensive Analysis Identifies Variability in PI3K Pathway Alterations in Triple-Negative Breast Cancer Subtypes.

Reva K Basho, Li Zhao, Jason B White, Lei Huo, Roland L Bassett, Elizabeth A Mittendorf, Alastair Thompson, Jennifer K Litton, Naoto Ueno, Banu Arun and 11 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in JCO precision oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02276443 (ARTEMIS), which is not on this map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02276443 naactive not recruitingnot on this map

ARTEMIS: A Robust TNBC Evaluation FraMework to Improve Survival

TypeinterventionalSponsorM.D. Anderson Cancer CenterRan2015 to 2026Enrolled798ConditionsInvasive Breast Carcinoma, Stage I Breast Cancer AJCC v7, Stage IA Breast Cancer AJCC v7, Stage IB Breast Cancer AJCC v7ArmsChemotherapy, Immunotherapy, Laboratory Biomarker Analysis, Lymph Node Biopsy, Ultrasonography
3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. High uPAR and Low miR-221 Expression Predict Poor Disease-Free Survival in Triple-Negative Breast Cancer.Pathophysiology : the official journal of the International Society for Pathophysiology · 2026
    Article
  5. Article
  6. Immune evasion and resistance in breast cancer.American journal of cancer research · 2025
    Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 1 country.

Reva K BashoEllison Institute of Technology, Los Angeles, CA.ORCID 0000-0002-4132-7523
Li ZhaoUniversity of Texas MD Anderson Cancer Center, Houston, TX.
Jason B WhiteUniversity of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0001-7140-545X
Lei HuoUniversity of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0001-7533-9082
Roland L BassettUniversity of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0002-4534-2042
Elizabeth A MittendorfDana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-9762-8536
Alastair ThompsonBaylor College of Medicine, Houston, TX.
Jennifer K LittonUniversity of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0001-8390-4985
Naoto UenoUniversity of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0002-0166-7275
Banu ArunUniversity of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0002-5475-8509
Bora LimBaylor College of Medicine, Houston, TX.ORCID 0000-0002-4182-6058
Vicente ValeroUniversity of Texas MD Anderson Cancer Center, Houston, TX.
Debu TripathyUniversity of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0002-5711-2404
Jianhua ZhangUniversity of Texas MD Anderson Cancer Center, Houston, TX.
Beatriz E AdradaUniversity of Texas MD Anderson Cancer Center, Houston, TX.
Lumarie SantiagoUniversity of Texas MD Anderson Cancer Center, Houston, TX.
Elizabeth RavenbergUniversity of Texas MD Anderson Cancer Center, Houston, TX.
Sahil SethUniversity of Texas MD Anderson Cancer Center, Houston, TX.
Clinton YamUniversity of Texas MD Anderson Cancer Center, Houston, TX.
Stacy L MoulderUniversity of Texas MD Anderson Cancer Center, Houston, TX.
Senthil DamodaranUniversity of Texas MD Anderson Cancer Center, Houston, TX.ORCID 0000-0002-2470-0891
The University of Texas MD Anderson Cancer Center · USBaylor College of Medicine · USDana-Farber Cancer Institute · USLarry Ellison Foundation · USUniversity of Hawaiʻi at Mānoa · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Kathrin Milbury · 1985 to 2026
$290.8M
NCI NIH HHS P30 CA016672
6 · The paper itself

Abstract

purposeThe PI3K pathway is frequently altered in triple-negative breast cancer (TNBC). Limited cell line and human data suggest that TNBC tumors characterized as mesenchymal (M) and luminal androgen receptor (LAR) subtypes have increased incidence of alterations in the PI3K pathway. The impact of PI3K pathway alterations across TNBC subtypes is poorly understood.

methodsPretreatment tumor was evaluated from operable TNBC patients enrolled on a clinical trial of neoadjuvant therapy (NAT; A Robust TNBC Evaluation fraMework to Improve Survival [ClinicalTrials.gov identifier: NCT02276443]). Tumors were characterized into seven TNBC subtypes per Pietenpol criteria (basal-like 1, basal-like 2, immunomodulatory, M, mesenchymal stem-like, LAR, and unstable). Using whole-exome sequencing, RNA sequencing, and immunohistochemistry for PTEN, alterations were identified in 32 genes known to activate the PI3K pathway. Alterations in each subtype were associated with pathologic response to NAT.

resultsIn evaluated patients (N = 177), there was a significant difference in the incidence of PI3K pathway alterations across TNBC subtypes (

conclusionPI3K pathway alteration can affect response to NAT in TNBC, and targeted agents may improve outcomes, particularly in patients with M and LAR TNBC.

Indexed as

Antineoplastic AgentsTriple Negative Breast NeoplasmsClass I Phosphatidylinositol 3-KinasesHumansPhosphatidylinositol 3-KinasesAntineoplastic AgentsClass I Phosphatidylinositol 3-KinasesPhosphatidylinositol 3-Kinases

Identifiers

PMID38484209
PMCPMC10954064
OpenAlexW4392827744

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.