Evidence map›Paper›PMID 38483996›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Structural insights reveal interplay between LAG-3 homodimerization, ligand binding, and function.

John L Silberstein, Jasper Du, Kun-Wei Chan, Jessica A Frank, Irimpan I Mathews, Yong Bin Kim, Jia You, Qiao Lu, Jia Liu, Elliot A Philips and 7 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
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  14. Therapeutic potential of targeting LAG-3 in cancer.Journal for immunotherapy of cancer · 2025
    Review
  15. Exploring new frontiers in LAG-3 biology and therapeutics.Trends in pharmacological sciences · 2025
    Review
  16. One Step Ahead: Preventing Tumor Adaptation to Immune Therapy.American Society of Clinical Oncology educational book. American Society of Clinical Oncology. Annual Meeting · 2025
    Review
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

John L Silberstein *Program in Immunology, Stanford University School of Medicine, Stanford, CA 94305.ORCID 0000-0002-6996-556X
Jasper Du *Department of Pathology, New York University Grossman School of Medicine, New York, NY 10016.ORCID 0000-0003-4156-8949
Kun-Wei ChanDepartment of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, NY 10016.
Jessica A FrankDepartment of Bioengineering, Stanford University, Stanford, CA 94305.ORCID 0000-0001-5334-3240
Irimpan I MathewsSLAC National Accelerator Laboratory, Stanford Synchrotron Radiation Lightsource, Menlo Park, CA 94025.
Yong Bin KimDepartment of Bioengineering, Stanford University, Stanford, CA 94305.ORCID 0009-0002-8959-2630
Jia YouDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016.
Qiao LuDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016.ORCID 0000-0002-5930-3132
Jia LiuDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016.ORCID 0000-0003-3612-6089
Elliot A PhilipsDepartment of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, NY 10016.ORCID 0000-0002-6407-1890
Phillip LiuDepartment of Bioengineering, Stanford University, Stanford, CA 94305.ORCID 0000-0002-7935-7912
Eric RaoDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016.
Daniel FernandezMacromolecular Structure Knowledge Center, Stanford Sarafan ChEM-H Institute, Stanford, CA 94305.ORCID 0000-0002-6221-152X
Grayson E RodriguezProgram in Immunology, Stanford University School of Medicine, Stanford, CA 94305.ORCID 0009-0002-7386-2050
Xiang-Peng KongDepartment of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, NY 10016.
Jun WangDepartment of Pathology, New York University Grossman School of Medicine, New York, NY 10016.ORCID 0000-0002-6346-2929
Jennifer R CochranProgram in Immunology, Stanford University School of Medicine, Stanford, CA 94305.
New York University · USStanford University · USNYU Langone Health · USSLAC National Accelerator Laboratory · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
A Synchrotron Radiation Structural Biology ResourcesP30GM133894 · NIGMS · STANFORD UNIVERSITY · PI Ritimukta Sarangi · 2020 to 2026
$43.3M
MOLECULAR &CELLULAR IMMUNOBIOLOGYT32AI007290 · NIAID · STANFORD UNIVERSITY · PI Sean Curtis Bendall, Olivia M Martinez · 1985 to 2026
$27.0M
Project 4P50CA225450 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KIRCHHOFF, TOMAS · 2019 to 2025
$12.5M
Molecular Biophysics Training Program at StanfordT32GM136568 · NIGMS · STANFORD UNIVERSITY · PI Zev Bryant, KERWYN C. HUANG · 2021 to 2026
$3.7M
Translational Basic and Clinical Research Training in RheumatologyT32AR069515 · NIAMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Jill P Buyon, Jose U. Scher · 2017 to 2026
$2.9M
Elucidating the Role of Cancer-Associated FGL1 in Tumor Immunity and Developing FGL1-Guided Anti-LAG-3 Cancer ImmunotherapyR37CA273333 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI JUN WANG · 2022 to 2026
$2.8M
Elucidating the Immune Suppressive Mechanism of SIGLEC-15 in the Tumor MicroenvironmentR01CA269898 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI JUN WANG · 2023 to 2026
$2.3M
Functional characterization of SARS-CoV-2 myeloid cell receptors as an immunopathogenic mechanisms of COVID-19R21AI163924 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WANG, JUN · 2021 to 2022
$466k
Automated, High Content Imaging PlatformS10OD021727 · OD · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI YUN, CHI · 2018 to 2018
$300k
NCI NIH HHS P30 CA016087NCI NIH HHS P50 CA225450NCI NIH HHS R01 CA269898NCI NIH HHS R37 CA273333NIAID NIH HHS R21 AI163924NIAID NIH HHS T32 AI007290NIAMS NIH HHS T32 AR069515NIGMS NIH HHS P30 GM133894NIGMS NIH HHS T32 GM136568NIH HHS R01CA269898NIH HHS R21AI163924-02NIH HHS R37CA273333-01NIH HHS S10 OD021727
6 · The paper itself

Abstract

Lymphocyte activation gene-3 (LAG-3) is an inhibitory receptor expressed on activated T cells and an emerging immunotherapy target. Domain 1 (D1) of LAG-3, which has been purported to directly interact with major histocompatibility complex class II (MHCII) and fibrinogen-like protein 1 (FGL1), has been the major focus for the development of therapeutic antibodies that inhibit LAG-3 receptor-ligand interactions and restore T cell function. Here, we present a high-resolution structure of glycosylated mouse LAG-3 ectodomain, identifying that cis-homodimerization, mediated through a network of hydrophobic residues within domain 2 (D2), is critically required for LAG-3 function. Additionally, we found a previously unidentified key protein-glycan interaction in the dimer interface that affects the spatial orientation of the neighboring D1 domain. Mutation of LAG-3 D2 residues reduced dimer formation, dramatically abolished LAG-3 binding to both MHCII and FGL1 ligands, and consequentially inhibited the role of LAG-3 in suppressing T cell responses. Intriguingly, we showed that antibodies directed against D1, D2, and D3 domains are all capable of blocking LAG-3 dimer formation and MHCII and FGL-1 ligand binding, suggesting a potential allosteric model of LAG-3 function tightly regulated by dimerization. Furthermore, our work reveals unique epitopes, in addition to D1, that can be targeted for immunotherapy of cancer and other human diseases.

Indexed as

Histocompatibility Antigens Class IIT-LymphocytesAnimalsDimerizationFibrinogenHumansLigandsLymphocyte Activation Gene 3 ProteinMiceMutationFGL1 protein, humanFibrinogenHistocompatibility Antigens Class IILag3 protein, mouseLigandsLymphocyte Activation Gene 3 Proteincancer immunotherapydimerizationimmune checkpointLAG-3structural biology

Identifiers

PMID38483996
PMCPMC10962948
OpenAlexW4392796921

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.