Evidence map›Paper›PMID 38483992›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

On-the-fly Raman microscopy guaranteeing the accuracy of discrimination.

Koji Tabata, Hiroyuki Kawagoe, J Nicholas Taylor, Kentaro Mochizuki, Toshiki Kubo, Jean-Emmanuel Clement, Yasuaki Kumamoto, Yoshinori Harada, Atsuyoshi Nakamura, Katsumasa Fujita and 1 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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  5. On-the-fly Raman microscopy guaranteeing the accuracy of discrimination.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Koji Tabata *Research Center of Mathematics for Social Creativity, Research Institute for Electronic Science, Hokkaido University, Sapporo 001-0020, Hokkaido, Japan.
Hiroyuki Kawagoe *Department of Applied Physics, Osaka University, Suita 565-0871, Osaka, Japan.
J Nicholas TaylorResearch Center of Mathematics for Social Creativity, Research Institute for Electronic Science, Hokkaido University, Sapporo 001-0020, Hokkaido, Japan.
Kentaro MochizukiDepartment of Pathology and Cell Regulation, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto 602-8566, Kyoto, Japan.ORCID 0009-0006-2015-1457
Toshiki KuboDepartment of Applied Physics, Osaka University, Suita 565-0871, Osaka, Japan.ORCID 0000-0002-5696-4111
Jean-Emmanuel ClementInstitute for Chemical Reaction Design and Discovery, Hokkaido University, Sapporo 001-0021, Hokkaido, Japan.
Yasuaki KumamotoDepartment of Applied Physics, Osaka University, Suita 565-0871, Osaka, Japan.ORCID 0000-0002-4398-288X
Yoshinori HaradaDepartment of Pathology and Cell Regulation, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kyoto 602-8566, Kyoto, Japan.ORCID 0000-0001-5942-130X
Atsuyoshi NakamuraGraduate School of Information Science and Technology, Hokkaido University, Sapporo 060-0814, Hokkaido, Japan.
Katsumasa FujitaDepartment of Applied Physics, Osaka University, Suita 565-0871, Osaka, Japan.
Tamiki KomatsuzakiResearch Center of Mathematics for Social Creativity, Research Institute for Electronic Science, Hokkaido University, Sapporo 001-0020, Hokkaido, Japan.ORCID 0000-0001-7175-8474

Funding

Grant-in-Aid for Scientific Research on Innovative Areas 18H05408MEXT | Japan Science and Technology Agency (JST) JPMJCR1662MEXT | Japan Society for the Promotion of Science (JSPS) 25287105 25650044
6 · The paper itself

Abstract

Accelerating the measurement for discrimination of samples, such as classification of cell phenotype, is crucial when faced with significant time and cost constraints. Spontaneous Raman microscopy offers label-free, rich chemical information but suffers from long acquisition time due to extremely small scattering cross-sections. One possible approach to accelerate the measurement is by measuring necessary parts with a suitable number of illumination points. However, how to design these points during measurement remains a challenge. To address this, we developed an imaging technique based on a reinforcement learning in machine learning (ML). This ML approach adaptively feeds back "optimal" illumination pattern during the measurement to detect the existence of specific characteristics of interest, allowing faster measurements while guaranteeing discrimination accuracy. Using a set of Raman images of human follicular thyroid and follicular thyroid carcinoma cells, we showed that our technique requires 3,333 to 31,683 times smaller number of illuminations for discriminating the phenotypes than raster scanning. To quantitatively evaluate the number of illuminations depending on the requisite discrimination accuracy, we prepared a set of polymer bead mixture samples to model anomalous and normal tissues. We then applied a home-built programmable-illumination microscope equipped with our algorithm, and confirmed that the system can discriminate the sample conditions with 104 to 4,350 times smaller number of illuminations compared to standard point illumination Raman microscopy. The proposed algorithm can be applied to other types of microscopy that can control measurement condition on the fly, offering an approach for the acceleration of accurate measurements in various applications including medical diagnosis.

Indexed as

MicroscopySpectrum Analysis, RamanHumansMachine LearningNonlinear Optical MicroscopyThyroid Glandfollicular thyroid carcinomamulti-armed bandit algorithmprogrammable illuminationRaman microscopyreinforcement learning

Identifiers

PMID38483992
PMCPMC10962959

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.