Evidence map›Paper›PMID 38483694›Full record

ArticleJournal of imaging informatics in medicine2024

Checklist for Reproducibility of Deep Learning in Medical Imaging.

Mana Moassefi, Yashbir Singh, Gian Marco Conte, Bardia Khosravi, Pouria Rouzrokh, Sanaz Vahdati, Nabile Safdar, Linda Moy, Felipe Kitamura, Amilcare Gentili and 9 more

Erratum issuedAbstract read
In one paragraph

Article in Journal of imaging informatics in medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Mana MoassefiMayo Clinic Artificial Intelligence Laboratory, Department of Radiology, Mayo Clinic, 200 1st St SW, Rochester, MN, 55905, USA.
Yashbir SinghMayo Clinic Artificial Intelligence Laboratory, Department of Radiology, Mayo Clinic, 200 1st St SW, Rochester, MN, 55905, USA.
Gian Marco ConteMayo Clinic Artificial Intelligence Laboratory, Department of Radiology, Mayo Clinic, 200 1st St SW, Rochester, MN, 55905, USA.
Bardia KhosraviMayo Clinic Artificial Intelligence Laboratory, Department of Radiology, Mayo Clinic, 200 1st St SW, Rochester, MN, 55905, USA.
Pouria RouzrokhMayo Clinic Artificial Intelligence Laboratory, Department of Radiology, Mayo Clinic, 200 1st St SW, Rochester, MN, 55905, USA.
Sanaz VahdatiMayo Clinic Artificial Intelligence Laboratory, Department of Radiology, Mayo Clinic, 200 1st St SW, Rochester, MN, 55905, USA.
Nabile SafdarDepartment of Radiology and Imaging Sciences, Emory Healthcare, Emory University, Atlanta, GA, USA.
Linda MoyDepartment of Radiology, NYU Langone Health, New York, NY, USA.
Felipe KitamuraDasaInova, Dasa, Universidade Federal de São Paulo, São Paulo, Brazil.
Amilcare GentiliSan Diego VA Health Care System, San Diego, CA, USA.
Paras LakhaniDepartment of Radiology, Thomas Jefferson University Hospital, Philadelphia, PA, USA.
Nina KottlerRadiology Partners Research Institute, El Segundo, CA, USA.
Safwan S HalabiDepartment of Medical Imaging, Ann & Robert H. Lurie Children's Hospital of Chicago, Chicago, IL, USA.
Joseph H YacoubDepartment of Radiology, MedStar Georgetown University Hospital, Washington, DC, USA.
Yuankai HouDepartment of Electrical Engineering and Computer Science, Vanderbilt University, Nashville, TN, USA.
Khaled YounisPhilips Research North America, Cambridge, MD, USA.
Bradley J EricksonMayo Clinic Artificial Intelligence Laboratory, Department of Radiology, Mayo Clinic, 200 1st St SW, Rochester, MN, 55905, USA.
Elizabeth KrupinskiDepartment of Radiology and Imaging Science, Emory University School of Medicine, Atlanta, GA, USA.
Shahriar FaghaniMayo Clinic Artificial Intelligence Laboratory, Department of Radiology, Mayo Clinic, 200 1st St SW, Rochester, MN, 55905, USA. Faghani.Shahriar@Mayo.edu.ORCID 0000-0003-3275-2971

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The application of deep learning (DL) in medicine introduces transformative tools with the potential to enhance prognosis, diagnosis, and treatment planning. However, ensuring transparent documentation is essential for researchers to enhance reproducibility and refine techniques. Our study addresses the unique challenges presented by DL in medical imaging by developing a comprehensive checklist using the Delphi method to enhance reproducibility and reliability in this dynamic field. We compiled a preliminary checklist based on a comprehensive review of existing checklists and relevant literature. A panel of 11 experts in medical imaging and DL assessed these items using Likert scales, with two survey rounds to refine responses and gauge consensus. We also employed the content validity ratio with a cutoff of 0.59 to determine item face and content validity. Round 1 included a 27-item questionnaire, with 12 items demonstrating high consensus for face and content validity that were then left out of round 2. Round 2 involved refining the checklist, resulting in an additional 17 items. In the last round, 3 items were deemed non-essential or infeasible, while 2 newly suggested items received unanimous agreement for inclusion, resulting in a final 26-item DL model reporting checklist derived from the Delphi process. The 26-item checklist facilitates the reproducible reporting of DL tools and enables scientists to replicate the study's results.

Indexed as

ChecklistDeep LearningDelphi TechniqueDiagnostic ImagingHumansReproducibility of ResultsSurveys and QuestionnairesChecklistDeep learningDelphiReproducibility

Identifiers

PMID38483694
PMCPMC11300409

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.