Evidence map›Paper›PMID 38483171›Full record

ArticleApplied and environmental microbiology2024

The white rot basidiomycete

Alexander N Kapich, Hideki Suzuki, Kolby C Hirth, Elena Fernández-Fueyo, Angel T Martínez, Carl J Houtman, Kenneth E Hammel

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Alexander N KapichUS Forest Products Laboratory, Madison, Wisconsin, USA.
Hideki SuzukiUS Forest Products Laboratory, Madison, Wisconsin, USA.
Kolby C HirthUS Forest Products Laboratory, Madison, Wisconsin, USA.
Elena Fernández-FueyoCentro de Investigaciones Biológicas "Margarita Salas", Consejo Superior de Investigaciones Científicas, Madrid, Spain.
Angel T MartínezCentro de Investigaciones Biológicas "Margarita Salas", Consejo Superior de Investigaciones Científicas, Madrid, Spain.ORCID 0000-0002-1584-2863
Carl J HoutmanUS Forest Products Laboratory, Madison, Wisconsin, USA.
Kenneth E HammelDepartment of Bacteriology, University of Wisconsin, Madison, Wisconsin, USA.ORCID 0000-0002-2935-5847
Forest Products Laboratory · USConsejo Superior de Investigaciones Científicas · ESUniversity of Wisconsin–Madison · US

Funding

U.S. Department of Energy (DOE) DE-SC0006929
6 · The paper itself

Abstract

The ability of some white rot basidiomycetes to remove lignin selectively from wood indicates that low molecular weight oxidants have a role in ligninolysis. These oxidants are likely free radicals generated by fungal peroxidases from compounds in the biodegrading wood. Past work supports a role for manganese peroxidases (MnPs) in the production of ligninolytic oxidants from fungal membrane lipids. However, the fatty acid alkylperoxyl radicals initially formed during this process are not reactive enough to attack the major structures in lignin. Here, we evaluate the hypothesis that the peroxidation of fatty aldehydes might provide a source of more reactive acylperoxyl radicals. We found that

Indexed as

BasidiomycotaManganesePolyporalesAldehydesFatty AcidsFungal ProteinsLigninOxidantsPeroxidases2-nonenalAldehydesFatty Acidsfatty aldehydeFungal ProteinsLigninManganeseOxidantsPeroxidasesfatty aldehydesfree radicalsligninolysismanganese peroxidasewhite rot fungus

Identifiers

PMID38483171
PMCPMC11022559
OpenAlexW4392892763

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.