Evidence map›Paper›PMID 38481402›Full record

ArticleFrontiers in plant science2024

Genetic basis and selection of glyceollin elicitation in wild soybean.

Farida Yasmin, Hengyou Zhang, Larry Leamy, Baosheng Wang, Jason Winnike, Robert W Reid, Cory R Brouwer, Bao-Hua Song

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Farida Yasmin *Department of Biological Sciences, The University of North Carolina at Charlotte, Charlotte, NC, United States.
Hengyou Zhang *Department of Biological Sciences, The University of North Carolina at Charlotte, Charlotte, NC, United States.
Larry LeamyDepartment of Biological Sciences, The University of North Carolina at Charlotte, Charlotte, NC, United States.
Baosheng WangKey Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China.
Jason WinnikeDavid H. Murdock Research Institute, Kannapolis, NC, United States.
Robert W ReidDepartment of Bioinformatics and Genomics, The University of North Carolina at Charlotte, Charlotte, NC, United States.
Cory R BrouwerDepartment of Bioinformatics and Genomics, The University of North Carolina at Charlotte, Charlotte, NC, United States.
Bao-Hua SongDepartment of Biological Sciences, The University of North Carolina at Charlotte, Charlotte, NC, United States.
University of North Carolina at Charlotte · USBeijing Botanical Garden · CNDavid H. Murdock Research Institute · US

Funding

Unraveling molecular basis of phytochemical accumulation toward improved human healthR15AT011603 · NCCIH · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI SONG, BAO-HUA · 2022 to 2022
$446k
Molecular basis and evolution of complex trait variation with significance in human healthR15GM122029 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI SONG, BAO-HUA · 2016 to 2016
$439k
NCCIH NIH HHS R15 AT011603NIGMS NIH HHS R15 GM122029
6 · The paper itself

Abstract

Glyceollins, a family of phytoalexins elicited in legume species, play crucial roles in environmental stress response (e.g., defending against pathogens) and human health. However, little is known about the genetic basis of glyceollin elicitation. In the present study, we employed a metabolite-based genome-wide association (mGWA) approach to identify candidate genes involved in glyceollin elicitation in genetically diverse and understudied wild soybeans subjected to soybean cyst nematode. In total, eight SNPs on chromosomes 3, 9, 13, 15, and 20 showed significant associations with glyceollin elicitation. Six genes fell into two gene clusters that encode glycosyltransferases in the phenylpropanoid pathway and were physically close to one of the significant SNPs (ss715603454) on chromosome 9. Additionally, transcription factors (TFs) genes such as

Indexed as

candidate geneepistasisgene clusterGlycine sojamGWASphytoalexin

Identifiers

PMID38481402
PMCPMC10933117
OpenAlexW4392235856

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.