Evidence map›Paper›PMID 38480743›Full record

ArticleNPJ biofilms and microbiomes2024

Intestinal dual-specificity phosphatase 6 regulates the cold-induced gut microbiota remodeling to promote white adipose browning.

Pei-Chen Chen, Tzu-Pei Tsai, Yi-Chu Liao, Yu-Chieh Liao, Hung-Wei Cheng, Yi-Hsiu Weng, Chiao-Mei Lin, Cheng-Yuan Kao, Chih-Cheng Tai, Jhen-Wei Ruan

Open access · goldAbstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Pei-Chen Chen *Department of Medical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan, 70101, Taiwan.ORCID http://orcid.org/0000-0002-5677-9223
Tzu-Pei Tsai *Department of Medical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan, 70101, Taiwan.ORCID http://orcid.org/0000-0002-3279-0938
Yi-Chu LiaoInstitute of Population Health Sciences, National Health Research Institutes, Miaoli, 35053, Taiwan.ORCID http://orcid.org/0000-0003-1067-6285
Yu-Chieh LiaoInstitute of Population Health Sciences, National Health Research Institutes, Miaoli, 35053, Taiwan.ORCID http://orcid.org/0000-0002-4360-7932
Hung-Wei ChengInstitute of Population Health Sciences, National Health Research Institutes, Miaoli, 35053, Taiwan.ORCID http://orcid.org/0000-0002-1559-0061
Yi-Hsiu WengDepartment of Medical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan, 70101, Taiwan.ORCID http://orcid.org/0009-0003-9263-0172
Chiao-Mei LinImmunology Research Center, National Health Research Institutes, Zhunan, Miaoli, 35053, Taiwan.
Cheng-Yuan KaoImmunology Research Center, National Health Research Institutes, Zhunan, Miaoli, 35053, Taiwan.ORCID http://orcid.org/0000-0003-0946-9270
Chih-Cheng TaiTainnovation Inc., Los Gatos, CA, 95032, USA.ORCID http://orcid.org/0000-0001-8845-6181
Jhen-Wei RuanDepartment of Medical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan, 70101, Taiwan. jhenweiruan@mail.ncku.edu.tw.ORCID http://orcid.org/0000-0002-0636-1937
National Health Research Institutes · TWNational Cheng Kung University · TWEduInnovation · US

Funding

Ministry of Science and Technology, Taiwan (Ministry of Science and Technology of Taiwan) 107-2320-B-006 -020 -MY2Ministry of Science and Technology, Taiwan (Ministry of Science and Technology of Taiwan) 108-2320-B-006 -051 -MY3
6 · The paper itself

Abstract

Gut microbiota rearrangement induced by cold temperature is crucial for browning in murine white adipose tissue. This study provides evidence that DUSP6, a host factor, plays a critical role in regulating cold-induced gut microbiota rearrangement. When exposed to cold, the downregulation of intestinal DUSP6 increased the capacity of gut microbiota to produce ursodeoxycholic acid (UDCA). The DUSP6-UDCA axis is essential for driving Lachnospiraceae expansion in the cold microbiota. In mice experiencing cold-room temperature (CR) transitions, prolonged DUSP6 inhibition via the DUSP6 inhibitor (E/Z)-BCI maintained increased cecal UDCA levels and cold-like microbiota networks. By analyzing DUSP6-regulated microbiota dynamics in cold-exposed mice, we identified Marvinbryantia as a genus whose abundance increased in response to cold exposure. When inoculated with human-origin Marvinbryantia formatexigens, germ-free recipient mice exhibited significantly enhanced browning phenotypes in white adipose tissue. Moreover, M. formatexigens secreted the methylated amino acid Nε-methyl-L-lysine, an enriched cecal metabolite in Dusp6 knockout mice that reduces adiposity and ameliorates nonalcoholic steatohepatitis in mice. Our work revealed that host-microbiota coadaptation to cold environments is essential for regulating the browning-promoting gut microbiome.

Indexed as

Gastrointestinal MicrobiomeAdiposityAnimalsCold TemperatureDual Specificity Phosphatase 6Dual-Specificity PhosphatasesHumansMiceObesityDual Specificity Phosphatase 6Dual-Specificity PhosphatasesDusp6 protein, mouse

Identifiers

PMID38480743
PMCPMC10937957
OpenAlexW4392745936

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.